RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 COL22A1Q8NFW1 1626 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-204ENST00000504131 PIK3C2AO00443 1686 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 LRRC37A3O60309 1634 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 YDJCA8MPS7 323 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 SGK494L7N484 410 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 GEMIN2O14893 280 aaKnown RBP5.71□□□□□ -1.5
CLCN3-204ENST00000504131 CA1P00915 261 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-204ENST00000504131 P04436 131 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 HLA-DQB2P05538 268 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 EPXP11678 715 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 BMP3P12645 472 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 CD58P19256 250 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 PNLIPRP1P54315 467 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 RBX1P62877 108 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 GAB1Q13480 694 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 TMEM176BQ3YBM2 270 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-204ENST00000504131 SFRP4Q6FHJ7 346 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-204ENST00000504131 H1FNTQ75WM6 255 aaPredicted RBP5.71□□□□□ -1.5
CLCN3-204ENST00000504131 YRDCQ86U90 279 aaKnown RBP5.71□□□□□ -1.5
CLCN3-204ENST00000504131 KCNRGQ8N5I3 272 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 DCAF4Q8WV16 495 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 PLD4Q96BZ4 506 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 SLC45A3Q96JT2 553 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 FAM110AQ9BQ89 295 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 ARHGAP9Q9BRR9 750 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 POLR2J2Q9GZM3 115 aaKnown RBP5.71□□□□□ -1.5
CLCN3-204ENST00000504131 WDCPQ9H6R7 721 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 ADAMTS5Q9UNA0 930 aa5.71□□□□□ -1.5
CLCN3-204ENST00000504131 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 OOEPA6NGQ2 149 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CLDN24A6NM45 220 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CORTO00230 105 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 VPREB1P12018 145 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 LAMP2P13473 410 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 HOXA5P20719 270 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 HRH1P35367 487 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 APLNRP35414 380 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 GLRXP35754 106 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SOX3P41225 446 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CAMPP49913 170 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 DLX5P56178 289 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CLDN12P56749 244 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 RNPS1Q15287 305 aaKnown RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PRSS53Q2L4Q9 553 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PYCR3Q53H96 274 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SOWAHCQ53LP3 525 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 UNQ6126/PRO20091Q6UXV3 157 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 IL34Q6ZMJ4 242 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 DOLPP1Q86YN1 238 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CLDN22Q8N7P3 220 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 GPR26Q8NDV2 337 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 OR10G4Q8NGN3 311 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SCAMP5Q8TAC9 235 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 WFDC12Q8WWY7 111 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 MRGPRX2Q96LB1 330 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 NRIP2Q9BQI9 281 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 MIEN1Q9BRT3 115 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 VPS29Q9UBQ0 182 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF490Q9ULM2 529 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 COL18A1P39060 1754 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 COL3A1P02461 1466 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF785A8K8V0 405 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 J3KR12 359 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 KLKB1P03952 638 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PSG1P11464 419 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ACKR3P25106 362 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 IL2RGP31785 369 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SLC19A1P41440 591 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 EMP2P54851 167 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 F2RL1P55085 397 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ZNF528Q3MIS6 628 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 MIIPQ5JXC2 388 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 DHRS11Q6UWP2 260 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 TMEM156Q8N614 296 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 EID2Q8N6I1 236 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 PYCR2Q96C36 320 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 STARD4Q96DR4 205 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 TMEM176AQ96HP8 235 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ALKBH3Q96Q83 286 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 FDXACB1Q9BRP7 624 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SNHG12Q9BXW3 62 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 RLIMQ9NVW2 624 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ZDHHC3Q9NYG2 299 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CLN8Q9UBY8 286 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 NAT8Q9UHE5 227 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 AMDHD2Q9Y303 409 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 ATRNO75882 1429 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 NHSL1Q5SYE7 1610 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CCL15-CCL14A0A0B4J2E2 113 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 A0A0G2JLL6 359 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-204ENST00000504131 MYMKA6NI61 221 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 RNASEK-C17orf49H0YIS7 233 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 SULT2B1O00204 365 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 LDB2O43679 373 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 FZD7O75084 574 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 F11P03951 625 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 FABP2P12104 132 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CLCN3P51790 818 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 WNT4P56705 351 aa5.7□□□□□ -1.5
CLCN3-204ENST00000504131 CLDN20P56880 219 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms