RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 RGS7BPQ6MZT1 257 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 TMEM154Q6P9G4 183 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 C20orf196Q8IYI0 205 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 TMEM123Q8N131 208 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 PAQR4Q8N4S7 273 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 EIF1ADQ8N9N8 165 aaKnown RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 IL17RDQ8NFM7 739 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 BBS10Q8TAM1 723 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 NANPQ8TBE9 248 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 RBMXL1Q96E39 390 aaKnown RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 SPDL1Q96EA4 605 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ITCHQ96J02 903 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF75AQ96N20 296 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF317Q96PQ6 595 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 WFDC6Q9BQY6 131 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 CENPOQ9BU64 300 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 RACGAP1Q9H0H5 632 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ARMC7Q9H6L4 198 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF665Q9H7R5 613 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 RMND5AQ9H871 391 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 C12orf10Q9HB07 376 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 CDH20Q9HBT6 801 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 MOV10Q9HCE1 1003 aaKnown RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 AURKAIP1Q9NWT8 199 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF224Q9NZL3 707 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 SELENONQ9NZV5 590 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 OPN4Q9UHM6 478 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 TAGLN3Q9UI15 199 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 IFT52Q9Y366 437 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 SH3GLB1Q9Y371 365 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 C17orf100A8MU93 164 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 CLIC1O00299 241 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 KPNA4O00629 521 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SPRY3O43610 288 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 RP2O75695 350 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 UBL3O95164 117 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 OR6A2O95222 327 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 OPN1SWP03999 348 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 IL6P05231 212 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 ADORA3P0DMS8 318 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 UMPSP11172 480 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF3P17036 446 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 MAKP20794 623 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 RAD52P43351 418 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 EVX1P49640 407 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 POLR2JP52435 117 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 HMGA2P52926 109 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 CDH12P55289 794 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 TMEM33P57088 247 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 KLF3P57682 345 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 RGS8P57771 180 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 RPS23P62266 143 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 LCN2P80188 198 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 TXNL4AP83876 142 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 TAF9Q16594 264 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 PDCD4Q53EL6 469 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SPATA46Q5T0L3 261 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 INTS11Q5TA45 600 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 DCAF12L2Q5VW00 463 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 FOXB2Q5VYV0 432 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 REP15Q6BDI9 236 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 ACSM5Q6NUN0 579 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 CRIP3Q6Q6R5 217 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 RBMS3Q6XE24 437 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 WDR88Q6ZMY6 472 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SLC35D2Q76EJ3 337 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 NET1Q7Z628 596 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF584Q8IVC4 421 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 CCDC36Q8IYA8 594 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 C10orf111Q8N326 155 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 LRRC18Q8N456 261 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 GLB1L3Q8NCI6 653 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SLC30A7Q8NEW0 376 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 OR1J1Q8NGS3 322 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 VANGL1Q8TAA9 524 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SYNPRQ8TBG9 265 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 AENQ8WTP8 325 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SNX33Q8WV41 574 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SLC25A28Q96A46 364 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SLC47A1Q96FL8 570 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 OR52B2Q96RD2 323 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 NR1H4Q96RI1 486 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 DCLRE1CQ96SD1 692 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF416Q9BWM5 594 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 PAIP1Q9H074 479 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 TMEM27Q9HBJ8 222 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SLC52A3Q9NQ40 469 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 HINT3Q9NQE9 182 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 DECR2Q9NUI1 292 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 NDUFA13Q9P0J0 144 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 ASH2LQ9UBL3 628 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SLC7A8Q9UHI5 535 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SLC13A4Q9UKG4 626 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF346Q9UL40 294 aaKnown RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 CAB39Q9Y376 341 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 WIPI2Q9Y4P8 454 aa4.67□□□□□ -1.66
SPTA1-209ENST00000498708 SOX21Q9Y651 276 aaPredicted RBP4.67□□□□□ -1.66
SPTA1-209ENST00000498708 PLECQ15149 4684 aaKnown RBP4.66□□□□□ -1.66
SPTA1-209ENST00000498708 IGHV3OR16-10A0A075B7F0 116 aa4.66□□□□□ -1.66
SPTA1-209ENST00000498708 IGHV1-69-2A0A0G2JMI3 117 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms