RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 PTCHD4Q6ZW05 846 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 ZBTB46Q86UZ6 589 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 GJC3Q8NFK1 279 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 OR2T33Q8NG76 320 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 OR10G2Q8NGC3 310 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 OR9Q2Q8NGE9 314 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 OR52E2Q8NGJ4 325 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 OR1J1Q8NGS3 322 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 OR4K13Q8NH42 304 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 AKR7LQ8NHP1 331 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 C10orf105Q8TEF2 133 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 GIPC3Q8TF64 312 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 SNX33Q8WV41 574 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 CANT1Q8WVQ1 401 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 NMNAT3Q96T66 252 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 SYT3Q9BQG1 590 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 PIMREGQ9BSJ6 248 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 WNT5BQ9H1J7 359 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 GSX1Q9H4S2 264 aaPredicted RBP9.04□□□□□ -0.96
FXR1-222ENST00000498658 EMC7Q9NPA0 242 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 TBC1D23Q9NUY8 699 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 PLEK2Q9NYT0 353 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 ATPIF1Q9UII2 106 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 B9D1Q9UPM9 204 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 POLR1DQ9Y2S0 133 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 U3KQV3 271 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 SETD2Q9BYW2 2564 aaPredicted RBP9.04□□□□□ -0.96
FXR1-222ENST00000498658 ZFHX3Q15911 3703 aa9.04□□□□□ -0.96
FXR1-222ENST00000498658 NIPBLQ6KC79 2804 aaeCLIP9.04□□□□□ -0.96
FXR1-222ENST00000498658 IGLV3-9A0A075B6K5 115 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 IGHV4-30-2A0A087WSY4 118 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 TCRBV3S1A0A5B6 114 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 J3QW42 95 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 BHLHE40O14503 412 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 DOK2O60496 412 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 E2F6O75461 281 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 LY6G6DO95868 133 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 IFNGP01579 166 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 DAOP14920 347 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.03□□□□□ -0.96
FXR1-222ENST00000498658 PCGF3Q3KNV8 242 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 CLEC12AQ5QGZ9 265 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 ZNF774Q6NX45 483 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 OR6V1Q8N148 313 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 LNX2Q8N448 690 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 PAQR4Q8N4S7 273 aaPredicted RBP9.03□□□□□ -0.96
FXR1-222ENST00000498658 NPEPL1Q8NDH3 523 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 ICA1LQ8NDH6 482 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 OR2T4Q8NH00 348 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 C4orf45Q96LM5 186 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 DCLRE1CQ96SD1 692 aaKnown RBP9.03□□□□□ -0.96
FXR1-222ENST00000498658 SMR3AQ99954 134 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 CDADC1Q9BWV3 514 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 HDHD2Q9H0R4 259 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 EGLN3Q9H6Z9 239 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 ZNF556Q9HAH1 456 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 SRA1Q9HD15 236 aaKnown RBP9.03□□□□□ -0.96
FXR1-222ENST00000498658 RPRD1BQ9NQG5 326 aaKnown RBP9.03□□□□□ -0.96
FXR1-222ENST00000498658 CYSLTR2Q9NS75 346 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 TBCCD1Q9NVR7 557 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 ASH2LQ9UBL3 628 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 CGGBP1Q9UFW8 167 aaPredicted RBP9.03□□□□□ -0.96
FXR1-222ENST00000498658 KCNG2Q9UJ96 466 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 KLHL21Q9UJP4 597 aa9.03□□□□□ -0.96
FXR1-222ENST00000498658 LOC100509620A0A075B734 347 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 IGLV1-36A0A0B4J1U3 117 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 PLSCR5A0PG75 271 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 OR6C6A6NF89 314 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 ABHD16AO95870 558 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 IGHV3-13P01766 116 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 HLA-DQA2P01906 255 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 USF1P22415 310 aaPredicted RBP9.02□□□□□ -0.97
FXR1-222ENST00000498658 HTR5AP47898 357 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 RGS6P49758 472 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 BLVRAP53004 296 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 PPP1CBP62140 327 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 MRPS11P82912 194 aaKnown RBP9.02□□□□□ -0.97
FXR1-222ENST00000498658 ECH1Q13011 328 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 ZMAT1Q5H9K5 638 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 FAM209AQ5JX71 171 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 SLC35F1Q5T1Q4 408 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 MBNL2Q5VZF2 373 aaKnown RBP9.02□□□□□ -0.97
FXR1-222ENST00000498658 TMEM154Q6P9G4 183 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 UGT2A3Q6UWM9 527 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 VASH1Q7L8A9 365 aaPredicted RBP9.02□□□□□ -0.97
FXR1-222ENST00000498658 ZNF786Q8N393 782 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 PAPD5Q8NDF8 572 aaKnown RBP9.02□□□□□ -0.97
FXR1-222ENST00000498658 SLC26A10Q8NG04 563 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 OR5L1Q8NGL2 311 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 OR2AJ1Q8NGZ0 328 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 OR1F12Q8NHA8 337 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 ABHD4Q8TB40 342 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 TEX47Q8TBZ9 253 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 UBASH3BQ8TF42 649 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 DNAJC9Q8WXX5 260 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 NRBF2Q96F24 287 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 FEVQ99581 238 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 TSSK6Q9BXA6 273 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 TEX12Q9BXU0 123 aa9.02□□□□□ -0.97
FXR1-222ENST00000498658 CADM1Q9BY67 442 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms