RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 C1orf174Q8IYL3 243 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 SDR9C7Q8NEX9 313 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 PRRG3Q9BZD7 231 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 OR2H1Q9GZK4 316 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 GDF2Q9UK05 429 aaPredicted RBP14.14□□□□□ -0.15
SF3A1-209ENST00000496189 COA3Q9Y2R0 106 aaPredicted RBP14.14□□□□□ -0.15
SF3A1-209ENST00000496189 CELSR1Q9NYQ6 3014 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 PLCE1Q9P212 2302 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 C5orf49A4QMS7 147 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 BAG2O95816 211 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 HLA-DQA2P01906 255 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 INHBBP09529 407 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 FAM157BP0CG42 384 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 CCL2P13500 99 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 PAICSP22234 425 aaKnown RBP14.13□□□□□ -0.15
SF3A1-209ENST00000496189 IGFBP5P24593 272 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 PCSK6P29122 969 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 EVX1P49640 407 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 CRISP1P54107 249 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 LSM6P62312 80 aaKnown RBP14.13□□□□□ -0.15
SF3A1-209ENST00000496189 PSG4Q00888 419 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 MOGQ16653 247 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 KDM4DQ6B0I6 523 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 BIVMQ86UB2 503 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 PQLC1Q8N2U9 271 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 NPEPL1Q8NDH3 523 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 OR2T4Q8NH00 348 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 OR4Q3Q8NH05 313 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 AKR7LQ8NHP1 331 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 C11orf40Q8WZ69 217 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 MRPL24Q96A35 216 aaKnown RBP14.13□□□□□ -0.15
SF3A1-209ENST00000496189 PLEKHA8Q96JA3 519 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 C9orf16Q9BUW7 83 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 CDADC1Q9BWV3 514 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 RACGAP1Q9H0H5 632 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 ELOVL3Q9HB03 270 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 SRA1Q9HD15 236 aaKnown RBP14.13□□□□□ -0.15
SF3A1-209ENST00000496189 EMC7Q9NPA0 242 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 RPRD1BQ9NQG5 326 aaKnown RBP14.13□□□□□ -0.15
SF3A1-209ENST00000496189 CMC2Q9NRP2 79 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 B9D1Q9UPM9 204 aa14.13□□□□□ -0.15
SF3A1-209ENST00000496189 F8P00451 2351 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 A0A1W2PPW3 197 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 OR6C68A6NDL8 312 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 ANKRD65E5RJM6 399 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 H7C1Q1 480 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 SGCEO43556 437 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 DOK2O60496 412 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 MT-ND5P03915 603 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 UCP2P55851 309 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 CDK5Q00535 292 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 ZBTB46Q86UZ6 589 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 IQCF1Q8N6M8 205 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 SLC37A3Q8NCC5 494 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 SNX33Q8WV41 574 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 FOXN4Q96NZ1 517 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 OR51B6Q9H340 312 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 MS4A5Q9H3V2 200 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 MYOZ1Q9NP98 299 aaPredicted RBP14.12□□□□□ -0.15
SF3A1-209ENST00000496189 PLEK2Q9NYT0 353 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 DUSP13Q9UII6 198 aa14.12□□□□□ -0.15
SF3A1-209ENST00000496189 MAP1AP78559 2803 aaPredicted RBP14.12□□□□□ -0.15
SF3A1-209ENST00000496189 USF3Q68DE3 2245 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 TRIM64A6NGJ6 449 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 TRIM64BA6NI03 449 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 M0R233 179 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 SMAD7O15105 426 aaKnown RBP14.11□□□□□ -0.15
SF3A1-209ENST00000496189 SYNGR3O43761 229 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 GPRIN2O60269 458 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 NDUFS7O75251 213 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 F12P00748 615 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-209ENST00000496189 COX5BP10606 129 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 GCH1P30793 250 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 HTR5AP47898 357 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 BLVRAP53004 296 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 SLC25A1P53007 311 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 KLF3P57682 345 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-209ENST00000496189 ENDOGQ14249 297 aaKnown RBP14.11□□□□□ -0.15
SF3A1-209ENST00000496189 NKPD1Q17RQ9 610 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 MST1LQ2TV78 715 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 ZNF774Q6NX45 483 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 OR6V1Q8N148 313 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 CYB561A3Q8NBI2 242 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 CPEB3Q8NE35 698 aaKnown RBP14.11□□□□□ -0.15
SF3A1-209ENST00000496189 PROKR2Q8NFJ6 384 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 GJC3Q8NFK1 279 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 OR1J1Q8NGS3 322 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 OR2AJ1Q8NGZ0 328 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 SYNPRQ8TBG9 265 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 TSSK2Q96PF2 358 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 SYT3Q9BQG1 590 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 WNT5BQ9H1J7 359 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 SLC25A19Q9HC21 320 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 SLCO1C1Q9NYB5 712 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 ASH2LQ9UBL3 628 aa14.11□□□□□ -0.15
SF3A1-209ENST00000496189 HIVEP1P15822 2718 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 IGLV1-36A0A0B4J1U3 117 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 ZNF823P16415 610 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 ALDH3A2P51648 485 aa14.1□□□□□ -0.15
SF3A1-209ENST00000496189 RAD23AP54725 363 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms