RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 MAB21L1Q13394 359 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 CAPRIN1Q14444 709 aaKnown RBP3.52□□□□□ -1.85
SSR3-208ENST00000496050 ARL9Q6T311 187 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 NPSR1Q6W5P4 371 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 FAM184AQ8NB25 1140 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 NUBPLQ8TB37 319 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 TMEM230Q96A57 120 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 BMFQ96LC9 184 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 UCK2Q9BZX2 261 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 MRM3Q9HC36 420 aaKnown RBP3.52□□□□□ -1.85
SSR3-208ENST00000496050 LYRM4Q9HD34 91 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 SLC40A1Q9NP59 571 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 UVRAGQ9P2Y5 699 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 RAB26Q9ULW5 256 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 SCN2AQ99250 2005 aa3.52□□□□□ -1.85
SSR3-208ENST00000496050 IGLV4-69A0A075B6H9 119 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 A0A1B0GTQ1 180 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 INS-IGF2F8WCM5 200 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 HLA-DPB1P04440 258 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 CLTAP09496 248 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 GGT1P19440 569 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 OR1E1P30953 314 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 CEACAM3P40198 252 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 SLC1A2P43004 574 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 CRISP1P54107 249 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 ARG2P78540 354 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 RAD51Q06609 339 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 ERCC8Q13216 396 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 ILKQ13418 452 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 ITIH4Q14624 930 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 ZNF726P1Q15940 193 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 UBE2SQ16763 222 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 AGBL2Q5U5Z8 902 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 FAM92BQ6ZTR7 304 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 ENTHD1Q8IYW4 607 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 GLYATL2Q8WU03 294 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 GALNT14Q96FL9 552 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 OPALINQ96PE5 141 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 SLC17A9Q9BYT1 436 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 NOX3Q9HBY0 568 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 CRLF2Q9HC73 371 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 LHX9Q9NQ69 397 aa3.51□□□□□ -1.85
SSR3-208ENST00000496050 TRMT112Q9UI30 125 aaKnown RBP3.51□□□□□ -1.85
SSR3-208ENST00000496050 ZNFX1Q9P2E3 1918 aaKnown RBP3.5□□□□□ -1.85
SSR3-208ENST00000496050 UBN2Q6ZU65 1347 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 PHLPP2Q6ZVD8 1323 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 IGHV5-51A0A0C4DH38 117 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 A0A1B0GW55 424 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 AIREO43918 545 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 CDC40O60508 579 aaKnown RBP eCLIP3.5□□□□□ -1.85
SSR3-208ENST00000496050 FLOT1O75955 427 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 SLC25A14O95258 325 aaPredicted RBP3.5□□□□□ -1.85
SSR3-208ENST00000496050 HLA-HP01893 362 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 UBTFL6P0CB48 400 aaPredicted RBP3.5□□□□□ -1.85
SSR3-208ENST00000496050 UBCP0CG48 685 aaKnown RBP3.5□□□□□ -1.85
SSR3-208ENST00000496050 DUX4L2P0CJ85 424 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 DUX4L3P0CJ86 424 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 DUX4L5P0CJ88 424 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 DUX4L6P0CJ89 424 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 DUX4L7P0CJ90 424 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 RPS5P46782 204 aaKnown RBP3.5□□□□□ -1.85
SSR3-208ENST00000496050 SEMG2Q02383 582 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 NCF4Q15080 339 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 RGNQ15493 299 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 PLCXD3Q63HM9 321 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 OR52W1Q6IF63 320 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 DNAJC24Q6P3W2 148 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 DUX4L9Q6RFH8 374 aaPredicted RBP3.5□□□□□ -1.85
SSR3-208ENST00000496050 MRPL55Q7Z7F7 128 aaKnown RBP3.5□□□□□ -1.85
SSR3-208ENST00000496050 SDHCQ99643 169 aaPredicted RBP3.5□□□□□ -1.85
SSR3-208ENST00000496050 ANKRD60Q9BZ19 345 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 PLA2G2FQ9BZM2 168 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 PIGUQ9H490 435 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 BEX1Q9HBH7 125 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 CHRAC1Q9NRG0 131 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 AGPAT4Q9NRZ5 378 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 CTSFQ9UBX1 484 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 DUX4Q9UBX2 424 aa3.5□□□□□ -1.85
SSR3-208ENST00000496050 MTCL1Q9Y4B5 1905 aaKnown RBP3.49□□□□□ -1.85
SSR3-208ENST00000496050 IGLV3-16A0A075B6K0 115 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 TSPAN11A1L157 253 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 RAD51CO43502 376 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 HBE1P02100 147 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 CTRB1P17538 263 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 ATF6P18850 670 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 RAB3AP20336 220 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 LONP1P36776 959 aaKnown RBP3.49□□□□□ -1.85
SSR3-208ENST00000496050 ZNF138P52744 262 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 UCNP55089 124 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 CLDN18P56856 261 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 UBE2NP61088 152 aaKnown RBP3.49□□□□□ -1.85
SSR3-208ENST00000496050 SPAG1Q07617 926 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 TPTE2P1Q5T6R2 138 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 PIP5KL1Q5T9C9 394 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 GPR107Q5VW38 600 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 METTL21CQ5VZV1 264 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 Q6P435 159 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 TIFABQ6ZNK6 161 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 C12orf56Q8IXR9 622 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 SAXO1Q8IYX7 474 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms