RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	ZNF511	Q8NB15	262 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	BBS1	Q8NFJ9	593 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	NRG4	Q8WWG1	115 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	NEUROG1	Q92886	237 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	UBE2F	Q969M7	185 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	HRASLS5	Q96KN8	279 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	OR2H1	Q9GZK4	316 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	WNT5B	Q9H1J7	359 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	TOR3A	Q9H497	397 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	RIBC2	Q9H4K1	309 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	ENOPH1	Q9UHY7	261 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	LHFPL6	Q9Y693	200 aa		10.31	□□□□□ -0.76
APTX-233	ENST00000496030	TVP23A	A6NH52	213 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	C12orf71	A8MTZ7	269 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	ABCD4	O14678	606 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	CD3E	P07766	207 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	ZNF35	P13682	527 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	RAD23A	P54725	363 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	NAAA	Q02083	359 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	TEK	Q02763	1124 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	HGFAC	Q04756	655 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	GLO1	Q04760	184 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	SLC34A1	Q06495	639 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	PCK2	Q16822	640 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	LRRC36	Q1X8D7	754 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	PABPC1L2A	Q5JQF8	200 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	AADACL4	Q5VUY2	407 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	B3GLCT	Q6Y288	498 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	ZNF704	Q6ZNC4	412 aa	Predicted RBP	10.3	□□□□□ -0.76
APTX-233	ENST00000496030	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.3	□□□□□ -0.76
APTX-233	ENST00000496030	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.3	□□□□□ -0.76
APTX-233	ENST00000496030	TCEANC	Q8N8B7	351 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	PROKR2	Q8NFJ6	384 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	KBTBD8	Q8NFY9	601 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	AKR7L	Q8NHP1	331 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	WDR76	Q9H967	626 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	MARCH7	Q9H992	704 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	RNPEPL1	Q9HAU8	725 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	MOV10	Q9HCE1	1003 aa	Known RBP	10.3	□□□□□ -0.76
APTX-233	ENST00000496030	CYB5R1	Q9UHQ9	305 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	NDRG4	Q9ULP0	352 aa	Known RBP	10.3	□□□□□ -0.76
APTX-233	ENST00000496030	RNF115	Q9Y4L5	304 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	TIMM10B	Q9Y5J6	103 aa		10.3	□□□□□ -0.76
APTX-233	ENST00000496030	LOC100509620	A0A075B734	347 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	CCDC182	A6NF36	153 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030		E7EQL1	145 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	PRR23D1	E9PI22	279 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-233	ENST00000496030	ATP6V1G2-DDX39B	F2Z307	99 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	TLX2	O43763	284 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-233	ENST00000496030	GLCE	O94923	617 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-233	ENST00000496030	GUCA1A	P43080	201 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-233	ENST00000496030	CENPA	P49450	140 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	RIPK1	Q13546	671 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	RSPO1	Q2MKA7	263 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-233	ENST00000496030	DEFB113	Q30KQ7	82 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	CCDC92	Q53HC0	331 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-233	ENST00000496030	ZNF774	Q6NX45	483 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	TMEM53	Q6P2H8	277 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	PAMR1	Q6UXH9	720 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	GALNT4	Q8N4A0	578 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	PACRGL	Q8N7B6	248 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	TMEM163	Q8TC26	289 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	IL4I1	Q96RQ9	567 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	PITX2	Q99697	317 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	WAC	Q9BTA9	647 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	OR51V1	Q9H2C8	321 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	RNF121	Q9H920	327 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	FAM118A	Q9NWS6	357 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	ASH2L	Q9UBL3	628 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	MOK	Q9UQ07	419 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	COMMD3-BMI1	R4GMX3	469 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	DSCAM	O60469	2012 aa		10.29	□□□□□ -0.76
APTX-233	ENST00000496030	OR6C6	A6NF89	314 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	RER1	O15258	196 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	SLC16A6	O15403	523 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	PRODH	O43272	600 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	RRP9	O43818	475 aa	Known RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	ATE1	O95260	518 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	RAB36	O95755	333 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	CCL2	P13500	99 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	PAICS	P22234	425 aa	Known RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	APEX1	P27695	318 aa	Known RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	FMO3	P31513	532 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	RPS27	P42677	84 aa	Known RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	PCBD1	P61457	104 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	NKX6-1	P78426	367 aa	Predicted RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	AQP6	Q13520	282 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	ZNF672	Q499Z4	452 aa	Predicted RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	TEX30	Q5JUR7	227 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	SLC18B1	Q6NT16	456 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	CORO6	Q6QEF8	472 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	VASH1	Q7L8A9	365 aa	Predicted RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	TIGD4	Q8IY51	512 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	CIART	Q8N365	385 aa	Predicted RBP	10.28	□□□□□ -0.76
APTX-233	ENST00000496030	IL17RD	Q8NFM7	739 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	OR10S1	Q8NGN2	331 aa		10.28	□□□□□ -0.76
APTX-233	ENST00000496030	IGFBPL1	Q8WX77	278 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms