RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	SELENOV	P59797	346 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	GLO1	Q04760	184 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	TNK1	Q13470	666 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	CLEC12A	Q5QGZ9	265 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	ZNF362	Q5T0B9	420 aa	Predicted RBP	10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	SAMD5	Q5TGI4	173 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	ARL9	Q6T311	187 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	UGT2A3	Q6UWM9	527 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	SVOPL	Q8N434	492 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	OR2T33	Q8NG76	320 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	OR10H5	Q8NGA6	315 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	OR52E2	Q8NGJ4	325 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	AKR7L	Q8NHP1	331 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	C11orf40	Q8WZ69	217 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	SLCO4A1	Q96BD0	722 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	NRBF2	Q96F24	287 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	DDO	Q99489	341 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	RHNO1	Q9BSD3	238 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	TSSK6	Q9BXA6	273 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	MRPL37	Q9BZE1	423 aa	Known RBP	10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	MS4A5	Q9H3V2	200 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	SRA1	Q9HD15	236 aa	Known RBP	10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	MYOZ1	Q9NP98	299 aa	Predicted RBP	10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	TBC1D23	Q9NUY8	699 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	GPR160	Q9UJ42	338 aa		10.64	□□□□□ -0.71
MRPL55-233	ENST00000495899	OR6C68	A6NDL8	312 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	DCTN6	O00399	190 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	SGCE	O43556	437 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	E2F6	O75461	281 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	MPZL1	O95297	269 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	FAM157B	P0CG42	384 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	GAA	P10253	952 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	ANXA8	P13928	327 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	ZNF250	P15622	560 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	CCNO	P22674	350 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	TUBG1	P23258	451 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	MOG	Q16653	247 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	SLC36A3	Q495N2	470 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	SLC35F1	Q5T1Q4	408 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	RGS7BP	Q6MZT1	257 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	ZNF774	Q6NX45	483 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	CLEC2A	Q6UVW9	174 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	CIART	Q8N365	385 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	NPEPL1	Q8NDH3	523 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	GJC3	Q8NFK1	279 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	OR8D4	Q8NGM9	314 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	OR2T4	Q8NH00	348 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	IPCEF1	Q8WWN9	437 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	NEU4	Q8WWR8	484 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	TSSK2	Q96PF2	358 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	VRK1	Q99986	396 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	NIPSNAP1	Q9BPW8	284 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	PLA2G12A	Q9BZM1	189 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	ZNF556	Q9HAH1	456 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	RPRD1B	Q9NQG5	326 aa	Known RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	TUBG2	Q9NRH3	451 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	ARMC1	Q9NVT9	282 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	PDP1	Q9P0J1	537 aa	Predicted RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	ATPIF1	Q9UII2	106 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	DUSP13	Q9UII6	198 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	KLHL21	Q9UJP4	597 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	PLCE1	Q9P212	2302 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	FLNA	P21333	2647 aa	Known RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	TEP1	Q99973	2627 aa	Known RBP	10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	ARID1A	O14497	2285 aa		10.63	□□□□□ -0.71
MRPL55-233	ENST00000495899	USF3	Q68DE3	2245 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	IGLV3-9	A0A075B6K5	115 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899		M0R233	179 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	NDUFS8	O00217	210 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	DEAF1	O75398	565 aa	Predicted RBP	10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	TP53	P04637	393 aa	Predicted RBP	10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	LCK	P06239	509 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	CENPA	P49450	140 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	KLF3	P57682	345 aa	Predicted RBP	10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	HIST1H3A	P68431	136 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	MSMP	Q1L6U9	139 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	HIST2H3PS2	Q5TEC6	136 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	C1orf146	Q5VVC0	180 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	CCDC121	Q6ZUS5	278 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	HIST2H3A	Q71DI3	136 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	ASRGL1	Q7L266	308 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	TMEM179B	Q7Z7N9	219 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	SDR9C7	Q8NEX9	313 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	SLC26A10	Q8NG04	563 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	SYNPR	Q8TBG9	265 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	TEX47	Q8TBZ9	253 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	DNAJC9	Q8WXX5	260 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	UTP4	Q969X6	686 aa	Known RBP	10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	DUS3L	Q96G46	650 aa	Known RBP	10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	C4orf45	Q96LM5	186 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	FOXN4	Q96NZ1	517 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	SORCS2	Q96PQ0	1159 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	REG4	Q9BYZ8	158 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	ELOVL3	Q9HB03	270 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	DYNLRB1	Q9NP97	96 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	SLCO1C1	Q9NYB5	712 aa		10.62	□□□□□ -0.71
MRPL55-233	ENST00000495899	ASH2L	Q9UBL3	628 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms