RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RBM34P42696 430 aaKnown RBP11.96□□□□□ -0.49
VARS-228ENST00000495010 RAG2P55895 527 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 SRSF4Q08170 494 aaKnown RBP11.96□□□□□ -0.49
VARS-228ENST00000495010 INTS11Q5TA45 600 aaKnown RBP11.96□□□□□ -0.49
VARS-228ENST00000495010 SLC25A47Q6Q0C1 308 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 ATG16L2Q8NAA4 619 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 TMEM255BQ8WV15 326 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 RAB40AQ8WXH6 277 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 UBE2FQ969M7 185 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 UPRTQ96BW1 309 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 CMBLQ96DG6 245 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 OR2V2Q96R30 315 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 PRSS27Q9BQR3 290 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 ALG12Q9BV10 488 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 PCDHAC1Q9H158 963 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 MMP27Q9H306 513 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 MIOXQ9UGB7 285 aa11.96□□□□□ -0.49
VARS-228ENST00000495010 SOX21Q9Y651 276 aaPredicted RBP11.96□□□□□ -0.49
VARS-228ENST00000495010 IGHV2-70DA0A0C4DH43 119 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 MDFIC2A0A1B0GVS7 189 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 NPIPB13A6NJU9 1138 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 NPIPB4C9JG80 1138 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 TMEM178BH3BS89 294 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 PLATP00750 562 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 KITLGP21583 273 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 MSR1P21757 451 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 IDH3AP50213 366 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 SLC18A1P54219 525 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 MTPNP58546 118 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 LAPTM4AQ15012 233 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 ALG10Q5BKT4 473 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 TTMPQ5BVD1 217 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 FAM205BPQ63HN1 556 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 OLFML2AQ68BL7 652 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 SLC27A4Q6P1M0 643 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 FIP1L1Q6UN15 594 aaKnown RBP11.95□□□□□ -0.5
VARS-228ENST00000495010 DLEU7Q6UYE1 221 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 DHDDSQ86SQ9 333 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 TSPYL5Q86VY4 417 aaPredicted RBP11.95□□□□□ -0.5
VARS-228ENST00000495010 KLBQ86Z14 1044 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 NKAIN4Q8IVV8 208 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 OR10S1Q8NGN2 331 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 TMEM239Q8WW34 195 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 NMD3Q96D46 503 aaKnown RBP11.95□□□□□ -0.5
VARS-228ENST00000495010 COG8Q96MW5 612 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 SIGLEC11Q96RL6 698 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 SLC30A2Q9BRI3 323 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 PARD6BQ9BYG5 372 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 C20orf141Q9NUB4 165 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 TBCCD1Q9NVR7 557 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 PDP1Q9P0J1 537 aaPredicted RBP11.95□□□□□ -0.5
VARS-228ENST00000495010 SH3GLB1Q9Y371 365 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 MED31Q9Y3C7 131 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 TRRAPQ9Y4A5 3859 aa11.95□□□□□ -0.5
VARS-228ENST00000495010 SRRM5B3KS81 715 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 IGF2P01344 180 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 HTR5AP47898 357 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 MMP16P51512 607 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 MAGOHP61326 146 aaKnown RBP11.94□□□□□ -0.5
VARS-228ENST00000495010 RPL27P61353 136 aaKnown RBP11.94□□□□□ -0.5
VARS-228ENST00000495010 GUCY1A3Q02108 690 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 GPR157Q5UAW9 335 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 BRD3OSQ6XYD6 125 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 Q6ZR03 302 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 NLRC3Q7RTR2 1065 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 SYT9Q86SS6 491 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 OR8B3Q8NGG8 313 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 TAMM41Q96BW9 452 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 NEIL1Q96FI4 390 aaPredicted RBP11.94□□□□□ -0.5
VARS-228ENST00000495010 OR8B2Q96RD0 313 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 CGREF1Q99674 301 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 PKP2Q99959 881 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 EBF4Q9BQW3 602 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 WACQ9BTA9 647 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 RABEP2Q9H5N1 569 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 GCM1Q9NP62 436 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 KIF17Q9P2E2 1029 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 NDUFAF1Q9Y375 327 aa11.94□□□□□ -0.5
VARS-228ENST00000495010 LRRC30A6NM36 301 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 ANGPT2O15123 496 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 DOK2O60496 412 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 ERLIN1O75477 346 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 ZNF205O95201 554 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 OR5F1O95221 314 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 COX5BP10606 129 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 SRP9P49458 86 aaKnown RBP11.93□□□□□ -0.5
VARS-228ENST00000495010 BPIFB3P59826 476 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 CTXN1P60606 82 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 SCRN3Q0VDG4 424 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 SELPLGQ14242 412 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 C1orf94Q6P1W5 598 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 OR5AS1Q8N127 324 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 POU5F2Q8N7G0 328 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 CLDN22Q8N7P3 220 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 ZNF420Q8TAQ5 688 aaPredicted RBP11.93□□□□□ -0.5
VARS-228ENST00000495010 LIPHQ8WWY8 451 aa11.93□□□□□ -0.5
VARS-228ENST00000495010 PTP4A1Q93096 173 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms