RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 OR10AD1Q8NGE0 317 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 LZICQ8WZA0 190 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 CMBLQ96DG6 245 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 BPIFA2Q96DR5 249 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 OR2V2Q96R30 315 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 ALG12Q9BV10 488 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 POFUT1Q9H488 388 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 ZNF696Q9H7X3 374 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 ZMAT3Q9HA38 289 aaKnown RBP8.12□□□□□ -1.11
UBR4-216ENST00000494503 PATZ1Q9HBE1 687 aaKnown RBP8.12□□□□□ -1.11
UBR4-216ENST00000494503 POLR1DQ9Y2S0 133 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 INSIG2Q9Y5U4 225 aa8.12□□□□□ -1.11
UBR4-216ENST00000494503 TGP01266 2768 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 A6NIZ1 184 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 H3BSA7 217 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 SGCEO43556 437 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 FSHBP01225 129 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 CRYBA1P05813 215 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 CD55P08174 381 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 IGHV4-38-2P0DP08 117 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 ZNF12P17014 697 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 MDH2P40926 338 aaKnown RBP8.11□□□□□ -1.11
UBR4-216ENST00000494503 RAP1BP61224 184 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 RAP1AP62834 184 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 GNB2P62879 340 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 IL13RA1P78552 427 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 GUCY1A3Q02108 690 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 SCRN3Q0VDG4 424 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 ST3GAL3Q11203 375 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 SF3A3Q12874 501 aaKnown RBP eCLIP8.11□□□□□ -1.115e-11■■■■□ 21.4
UBR4-216ENST00000494503 TMEM155Q4W5P6 130 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 AGBL2Q5U5Z8 902 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 FAM205BPQ63HN1 556 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 NANOGP8Q6NSW7 305 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 C17orf107Q6ZR85 190 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 OAFQ86UD1 273 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 NRMQ8IXM6 262 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 MUC20Q8N307 709 aaPredicted RBP8.11□□□□□ -1.11
UBR4-216ENST00000494503 DPP10Q8N608 796 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 OR13C2Q8NGS9 318 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 ZNF420Q8TAQ5 688 aaPredicted RBP8.11□□□□□ -1.11
UBR4-216ENST00000494503 FNDC8Q8TC99 324 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 LRRC58Q96CX6 371 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 SAMD8Q96LT4 415 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 ZNF48Q96MX3 618 aaPredicted RBP8.11□□□□□ -1.11
UBR4-216ENST00000494503 SEPHS2Q99611 448 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 SH3GL1Q99961 368 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 SSBP3Q9BWW4 388 aaPredicted RBP8.11□□□□□ -1.11
UBR4-216ENST00000494503 MAN2C1Q9NTJ4 1040 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 INTS9Q9NV88 658 aaKnown RBP8.11□□□□□ -1.11
UBR4-216ENST00000494503 PTTG3PQ9NZH4 202 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 RHCGQ9UBD6 479 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 GRHPRQ9UBQ7 328 aa8.11□□□□□ -1.11
UBR4-216ENST00000494503 PPIAL4EA0A075B759 164 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 PPIAL4CA0A0B4J2A2 164 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 MDFIC2A0A1B0GVS7 189 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 CEACAM18A8MTB9 384 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 EFCAB9A8MZ26 197 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 PPIAL4DF5H284 164 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 CYB5R3P00387 301 aaPredicted RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 RNASE1P07998 156 aaKnown RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 ADH4P08319 380 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 PPIAL4FP0DN26 164 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 MDKP21741 143 aaPredicted RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 GPR4P46093 362 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 SLC6A9P48067 706 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 SLC9A3P48764 834 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 MMP16P51512 607 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 ZNF133P52736 654 aaPredicted RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 CRYBA2P53672 197 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 CDK5R2Q13319 367 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 ENDOGQ14249 297 aaKnown RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 HLXQ14774 488 aaPredicted RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 SLC9A3R2Q15599 337 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 PDLIM3Q53GG5 364 aaPredicted RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 CYBRD1Q53TN4 286 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 KLF17Q5JT82 389 aaPredicted RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 ERICH5Q6P6B1 374 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 ZNF730Q6ZMV8 503 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 RRM2BQ7LG56 351 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 LRRC28Q86X40 367 aaPredicted RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 ZNF283Q8N7M2 679 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 BHLHE23Q8NDY6 225 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 SLC7A6Q92536 515 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 NMD3Q96D46 503 aaKnown RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 PLEKHA8Q96JA3 519 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 ATP6V1G3Q96LB4 118 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 FNDC11Q9BVV2 318 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 POLR2J2Q9GZM3 115 aaKnown RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 NDEL1Q9GZM8 345 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 POLR2J3Q9H1A7 115 aaKnown RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 POLE4Q9NR33 117 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 IL19Q9UHD0 177 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 LRCH1Q9Y2L9 728 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 HIF3AQ9Y2N7 669 aa8.1□□□□□ -1.11
UBR4-216ENST00000494503 SOX21Q9Y651 276 aaPredicted RBP8.1□□□□□ -1.11
UBR4-216ENST00000494503 WNK1Q9H4A3 2382 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 NPIPB13A6NJU9 1138 aa8.09□□□□□ -1.11
UBR4-216ENST00000494503 LRRC30A6NM36 301 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms