RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 BCL10O95999 233 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 IGHG1P01857 330 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 HLA-HP01893 362 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 MT-ND2P03891 347 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 FUT1P19526 365 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 GSTT1P30711 240 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 DAP3P51398 398 aaKnown RBP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 SNRPD2P62316 118 aaKnown RBP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 LSM11P83369 360 aaKnown RBP eCLIP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 RAB35Q15286 201 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 OCLNQ16625 522 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 HIST3H3Q16695 136 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 MST1LQ2TV78 715 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 NRN1LQ496H8 165 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 TMEM236Q5W0B7 351 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 PTCHD4Q6ZW05 846 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 AHSA2Q719I0 299 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 Q71RC1 249 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 CLVS1Q8IUQ0 354 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 NRMQ8IXM6 262 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 NOXO1Q8NFA2 376 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 ASB10Q8WXI3 467 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 FBXO17Q96EF6 278 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 FAM46AQ96IP4 442 aaKnown RBP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 ZNF75AQ96N20 296 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 COPS4Q9BT78 406 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 REG4Q9BYZ8 158 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 NOX3Q9HBY0 568 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 TMEM38BQ9NVV0 291 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 CLN6Q9NWW5 311 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 FBXO9Q9UK97 447 aaPredicted RBP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 FBXL3Q9UKT7 428 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 HIF3AQ9Y2N7 669 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 CDH10Q9Y6N8 788 aa11.42□□□□□ -0.58
ERCC3-209ENST00000494464 NIPBLQ6KC79 2804 aaeCLIP11.42□□□□□ -0.58
ERCC3-209ENST00000494464 B9A039 149 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 MCIDASD6RGH6 385 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 PIP5K1CO60331 668 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 CDK1P06493 297 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 CSF3P09919 207 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 CD79AP11912 226 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 ZNF14P17017 642 aaPredicted RBP11.41□□□□□ -0.58
ERCC3-209ENST00000494464 SERPINF1P36955 418 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 GIPRP48546 466 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 ZNF133P52736 654 aaPredicted RBP11.41□□□□□ -0.58
ERCC3-209ENST00000494464 TMBIM6P55061 237 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 EMX1Q04741 257 aaPredicted RBP11.41□□□□□ -0.58
ERCC3-209ENST00000494464 HGFACQ04756 655 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 PRKCDQ05655 676 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 PIGFQ07326 219 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 KRTAP1-1Q07627 177 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 GINS1Q14691 196 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 MEDAGQ5VYS4 303 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 RPL13AP3Q6NVV1 102 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 SLC27A4Q6P1M0 643 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 LRFN4Q6PJG9 635 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 CLEC2AQ6UVW9 174 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 ZNF620Q6ZNG0 422 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 OR10H5Q8NGA6 315 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 ISOC1Q96CN7 298 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 BCL7BQ9BQE9 202 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 MRPL13Q9BYD1 178 aaKnown RBP11.41□□□□□ -0.58
ERCC3-209ENST00000494464 CCDC90BQ9GZT6 254 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 INIPQ9NRY2 104 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 IL20Q9NYY1 176 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 IGHV4-30-2A0A087WSY4 118 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 DHHO43323 396 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 NOL3O60936 208 aaKnown RBP11.41□□□□□ -0.58
ERCC3-209ENST00000494464 RAB36O95755 333 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 IGHMP01871 453 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 F13BP05160 661 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 IGFBP1P08833 259 aaPredicted RBP11.41□□□□□ -0.58
ERCC3-209ENST00000494464 OR4A8P0C604 315 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 AQP2P41181 271 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 SLC15A1P46059 708 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 PPOXP50336 477 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 EFNA4P52798 201 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 CLRN1P58418 232 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 EFNB1P98172 346 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 ANKDD1AQ495B1 522 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 C10orf128Q5T292 105 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 ARMC4Q5T2S8 1044 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 SYT6Q5T7P8 510 aaPredicted RBP11.41□□□□□ -0.58
ERCC3-209ENST00000494464 UBE2UQ5VVX9 321 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 TMPRSS11FQ6ZWK6 438 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 DPPA2Q7Z7J5 298 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 SLC22A24Q8N4F4 322 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 OR8D4Q8NGM9 314 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 MOSPD2Q8NHP6 518 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 RORBQ92753 470 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 GGHQ92820 318 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 NMD3Q96D46 503 aaKnown RBP11.41□□□□□ -0.58
ERCC3-209ENST00000494464 BPIFA2Q96DR5 249 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 RHNO1Q9BSD3 238 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 TEX12Q9BXU0 123 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 PLA2G12AQ9BZM1 189 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 PLK3Q9H4B4 646 aa11.41□□□□□ -0.58
ERCC3-209ENST00000494464 EGLN3Q9H6Z9 239 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms