RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 PRODHO43272 600 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 SELENOFO60613 162 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 SPARCP09486 303 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 NAA10P41227 235 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 ZNF704Q6ZNC4 412 aaPredicted RBP15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 CFAP77Q6ZQR2 320 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 CDC20BQ86Y33 519 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 NRGNQ92686 78 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 TEAD3Q99594 435 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 TMEM204Q9BSN7 226 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 CYB5R1Q9UHQ9 305 aa15.51■□□□□ 0.07
PDLIM7-208ENST00000493815 IGHV2OR16-5A0A0B4J2B6 119 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 SHISA9B4DS77 424 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 SLC16A6O15403 523 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 DOK2O60496 412 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 MRPL3P09001 348 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 CCNOP22674 350 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 AQP4P55087 323 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 PLP2Q04941 152 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 NXNL2Q5VZ03 156 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 SLC18B1Q6NT16 456 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 SYT9Q86SS6 491 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 SLC30A7Q8NEW0 376 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 OR6N2Q8NGY6 317 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 LILRB1Q8NHL6 650 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 SLC7A6Q92536 515 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 INTS14Q96SY0 518 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 VCXQ9H320 206 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 MOV10Q9HCE1 1003 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 PLEK2Q9NYT0 353 aa15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 H2AFY2Q9P0M6 372 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 GDF2Q9UK05 429 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-208ENST00000493815 APCP25054 2843 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 LOC100509620A0A075B734 347 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 IQCMA0A1B0GVH7 501 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 SGCEO43556 437 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 CRYAAP02489 173 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 STOMP27105 288 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 ENTPD1P49961 510 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 SCRN3Q0VDG4 424 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 C3orf36Q3SXR2 165 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 CCDC92Q53HC0 331 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 MEPCEQ7L2J0 689 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 VASH1Q7L8A9 365 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 TIGD4Q8IY51 512 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 ENTHD1Q8IYW4 607 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 DHRSXQ8N5I4 330 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 OR2AJ1Q8NGZ0 328 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 ZNF582Q96NG8 517 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 KCNS3Q9BQ31 491 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 POU2F3Q9UKI9 436 aa15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 SETXQ7Z333 2677 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-208ENST00000493815 RTTNQ86VV8 2226 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 ENTPD6O75354 484 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 GNAO1P09471 354 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 PAX7P23759 505 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 BLVRAP53004 296 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 HCCSP53701 268 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 ADARB1P78563 741 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 KEAP1Q14145 624 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 SLC35D3Q5M8T2 416 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 SPATC1Q76KD6 591 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 DPY19L4Q7Z388 723 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 DCXRQ7Z4W1 244 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 AKAP1Q92667 903 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 MAP6Q96JE9 813 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 ADI1Q9BV57 179 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 OR51B6Q9H340 312 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 LIME1Q9H400 295 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 UBTD1Q9HAC8 227 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 KCNG2Q9UJ96 466 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 C5orf49A4QMS7 147 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 APOL3O95236 402 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 ZNF35P13682 527 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 APLNRP35414 380 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 HTR5AP47898 357 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 CDH11P55287 796 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 HIST1H3AP68431 136 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 HGFACQ04756 655 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 HIST2H3PS2Q5TEC6 136 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 KRT80Q6KB66 452 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 HIST2H3AQ71DI3 136 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 ALDH16A1Q8IZ83 802 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 GJC3Q8NFK1 279 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 TRUB1Q8WWH5 349 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 PLEKHF2Q9H8W4 249 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 MARCH7Q9H992 704 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 ATP23Q9Y6H3 246 aa15.48■□□□□ 0.07
PDLIM7-208ENST00000493815 HEATR1Q9H583 2144 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 SYNGR3O43761 229 aa15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 GOSR1O95249 250 aa15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 DBHP09172 617 aa15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 GABRB1P18505 474 aa15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 SNRPGP62308 76 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 PCK2Q16822 640 aa15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 ZNF672Q499Z4 452 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 C6orf52Q5T4I8 152 aa15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 VHLLQ6RSH7 139 aa15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 GID4Q8IVV7 300 aa15.47■□□□□ 0.07
PDLIM7-208ENST00000493815 DEPDC4Q8N2C3 294 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms