RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ZDHHC16Q969W1 377 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 FYTTD1Q96QD9 318 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 DDOQ99489 341 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TINAGL1Q9GZM7 467 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ZMAT3Q9HA38 289 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 HES4Q9HCC6 221 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 GPR173Q9NS66 373 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 LRRIQ1Q96JM4 1722 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 IGKV6D-41A0A0C4DH26 115 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 GPR31O00270 319 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ALPLP05186 524 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 CYC1P08574 325 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 CRISP2P16562 243 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 SRP9P49458 86 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TMEM25Q86YD3 366 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF573Q86YE8 665 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 C19orf47Q8N9M1 422 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 FAM174AQ8TBP5 190 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 LCORQ96JN0 433 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 IFT22Q9H7X7 185 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 IL23AQ9NPF7 189 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 MRPS2Q9Y399 296 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 PXDNQ92626 1479 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 RRP8O43159 456 aaKnown RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF354AO60765 605 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-221ENST00000493795 C1orf105O95561 183 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TPOP07202 933 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 TM4SF1P30408 202 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 DAPP51397 102 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 CDKN3Q16667 212 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF628Q5EBL2 1059 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 OR5AS1Q8N127 324 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ANKRD53Q8N9V6 530 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 ZBTB44Q8NCP5 570 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 OR5A2Q8NGI9 324 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 DTD2Q96FN9 168 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 HHIPQ96QV1 700 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 BANF2Q9H503 90 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 PRSS16Q9NQE7 514 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 LMTK2Q8IWU2 1503 aa7.22□□□□□ -1.25
BRCA1-221ENST00000493795 SIRPB1O00241 398 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 SYT5O00445 386 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 MT-ATP6P00846 226 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 FABP4P15090 132 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 POU3F3P20264 500 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-221ENST00000493795 PSMB6P28072 239 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 ZNF140P52738 457 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-221ENST00000493795 SPCS3P61009 180 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 Q3ZCU0 254 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 OR2B11Q5JQS5 317 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 TOE1Q96GM8 510 aaKnown RBP7.21□□□□□ -1.25
BRCA1-221ENST00000493795 RBM14Q96PK6 669 aaKnown RBP7.21□□□□□ -1.25
BRCA1-221ENST00000493795 NAA50Q9GZZ1 169 aaKnown RBP7.21□□□□□ -1.25
BRCA1-221ENST00000493795 DIP2BQ9P265 1576 aa7.21□□□□□ -1.25
BRCA1-221ENST00000493795 OR2T8A6NH00 312 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 ABCD3P28288 659 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 CLDN2P57739 230 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 IHHQ14623 411 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 CLEC12BQ2HXU8 276 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 ZNF385BQ569K4 471 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 HSD11B1LQ7Z5J1 315 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 MDGA1Q8NFP4 955 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 OR2AK2Q8NG84 335 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 GPX8Q8TED1 209 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 SLC39A13Q96H72 371 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 ZNF778Q96MU6 729 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 PECRQ9BY49 303 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 CGGBP1Q9UFW8 167 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-221ENST00000493795 ATP23Q9Y6H3 246 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 CDK2AP1O14519 115 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 SELENOFO60613 162 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 PVRP15151 417 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 EPHA2P29317 976 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 MAT1AQ00266 395 aaKnown RBP7.21□□□□□ -1.26
BRCA1-221ENST00000493795 TAZQ16635 292 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 LYSMD2Q8IV50 215 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 OR51F2Q8NH61 342 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 THOC3Q96J01 351 aaKnown RBP7.21□□□□□ -1.26
BRCA1-221ENST00000493795 CDCA3Q99618 268 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-221ENST00000493795 JAM3Q9BX67 310 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 OCEL1Q9H607 264 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 NDUFB11Q9NX14 153 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 GLRA1P23415 457 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 SLC5A2P31639 672 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 CD200P41217 278 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 MAML2Q8IZL2 1156 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-221ENST00000493795 GABRG1Q8N1C3 465 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 PRSS3P2Q8NHM4 247 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 NPAS1Q99742 590 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 PLA2G12AQ9BZM1 189 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 HSD3B7Q9H2F3 369 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 TAAR2Q9P1P5 351 aa7.21□□□□□ -1.26
BRCA1-221ENST00000493795 ZNF256Q9Y2P7 627 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-221ENST00000493795 TUBAL3A6NHL2 446 aa7.2□□□□□ -1.26
BRCA1-221ENST00000493795 H0YGG7 62 aa7.2□□□□□ -1.26
BRCA1-221ENST00000493795 H3BVH4 76 aa7.2□□□□□ -1.26
BRCA1-221ENST00000493795 ST8SIA5O15466 376 aa7.2□□□□□ -1.26
BRCA1-221ENST00000493795 NEURL1O76050 574 aa7.2□□□□□ -1.26
BRCA1-221ENST00000493795 GYPAP02724 150 aa7.2□□□□□ -1.26
BRCA1-221ENST00000493795 POU2F2P09086 479 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms