RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TBX5Q99593 518 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 ZNF416Q9BWM5 594 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 RNF121Q9H920 327 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 ADGRL4Q9HBW9 690 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 CCNB1IP1Q9NPC3 277 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 PLCXD1Q9NUJ7 323 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 MYRFQ9Y2G1 1151 aa11.73□□□□□ -0.53
MSH6-208ENST00000493177 C12orf71A8MTZ7 269 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 FADS2O95864 444 aaKnown RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 CST2P09228 141 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 CD79AP11912 226 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 RPS27P42677 84 aaKnown RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 CHN2P52757 468 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 HCCSP53701 268 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 LSM6P62312 80 aaKnown RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 RAB40BQ12829 278 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 EIF2B1Q14232 305 aaKnown RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 GABRA6Q16445 453 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 KCNMB1Q16558 191 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 TBRG1Q3YBR2 411 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 FAM27BQ5VT28 67 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 OR7E24Q6IFN5 339 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 CORO6Q6QEF8 472 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 STAC2Q6ZMT1 411 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 DPY19L4Q7Z388 723 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 SKA3Q8IX90 412 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 C1orf162Q8NEQ5 155 aaPredicted RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 STEAP2Q8NFT2 490 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 OR52I1Q8NGK6 324 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 IPCEF1Q8WWN9 437 aaPredicted RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 NANOS1Q8WY41 292 aaKnown RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 BCL2L2Q92843 193 aaPredicted RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 MYDGFQ969H8 173 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 RHNO1Q9BSD3 238 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 COPS4Q9BT78 406 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 HDHD5Q9BXW7 423 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 YTHDF1Q9BYJ9 559 aaKnown RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 MARCH7Q9H992 704 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 UBTD1Q9HAC8 227 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 ASH2LQ9UBL3 628 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 PSORS1C1Q9UIG5 152 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 KCNG2Q9UJ96 466 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 LAMP5Q9UJQ1 280 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 EXOGQ9Y2C4 368 aaKnown RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 PCDHGB1Q9Y5G3 927 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 ANKRD17O75179 2603 aaKnown RBP11.72□□□□□ -0.53
MSH6-208ENST00000493177 ABCA12Q86UK0 2595 aa11.72□□□□□ -0.53
MSH6-208ENST00000493177 APCP25054 2843 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 TEX15Q9BXT5 2789 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 A0A1W2PR80 420 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 ZNF670-ZNF695F2Z2N8 137 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 RAB36O95755 333 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 PATE4P0C8F1 98 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 PSMB1P20618 241 aaKnown RBP11.71□□□□□ -0.53
MSH6-208ENST00000493177 CRHBPP24387 322 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 SLC15A1P46059 708 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 PCBD1P61457 104 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 ACTC1P68032 377 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 ACTA1P68133 377 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 TUBA1BP68363 451 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 TUBA4AP68366 448 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 PIGFQ07326 219 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 ST3GAL4Q11206 333 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 ENDOGQ14249 297 aaKnown RBP11.71□□□□□ -0.53
MSH6-208ENST00000493177 SLC36A2Q495M3 483 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 NRN1LQ496H8 165 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 BEX5Q5H9J7 111 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 TMEM53Q6P2H8 277 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 TMEM154Q6P9G4 183 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 TUBA1AQ71U36 451 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 ZNF627Q7L945 461 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 THEM6Q8WUY1 208 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 TMEM80Q96HE8 168 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 FOXC2Q99958 501 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 TTTY10Q9BZA0 68 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 YIPF3Q9GZM5 350 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 CCDC90BQ9GZT6 254 aa11.71□□□□□ -0.53
MSH6-208ENST00000493177 MRPS18AQ9NVS2 196 aaKnown RBP11.71□□□□□ -0.53
MSH6-208ENST00000493177 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.53
MSH6-208ENST00000493177 CNOT2Q9NZN8 540 aaKnown RBP11.71□□□□□ -0.53
MSH6-208ENST00000493177 DAPL1A0PJW8 107 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 RGS10O43665 173 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 UBL3O95164 117 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 HLA-HP01893 362 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 OR2T7P0C7T2 308 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 PSKH1P11801 424 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 PIPP12273 146 aaPredicted RBP11.7□□□□□ -0.54
MSH6-208ENST00000493177 MYL12AP19105 171 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 AQP6Q13520 282 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 TEX30Q5JUR7 227 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 SLC18B1Q6NT16 456 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 SPNS3Q6ZMD2 512 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 SPATC1Q76KD6 591 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 DCXRQ7Z4W1 244 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 C17orf78Q8N4C9 275 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 OR2T27Q8NH04 317 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 OR52N5Q8NH56 324 aa11.7□□□□□ -0.54
MSH6-208ENST00000493177 S100PBPQ96BU1 408 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms