RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ZNF442Q9H7R0 627 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 MRPL22Q9NWU5 206 aaKnown RBP12.07□□□□□ -0.48
CCM2-217ENST00000492883 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
CCM2-217ENST00000492883 NDRG4Q9ULP0 352 aaKnown RBP12.07□□□□□ -0.48
CCM2-217ENST00000492883 CMAHPQ9Y471 501 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 CACNA1DQ01668 2161 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 UNC79Q9P2D8 2635 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 LOC100509620A0A075B734 347 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 EI24O14681 340 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 LCKP06239 509 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 COX5BP10606 129 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 GLRXP35754 106 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 CDKN1AP38936 164 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 HTR5AP47898 357 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 UCP2P55851 309 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 RPS23P62266 143 aaKnown RBP12.06□□□□□ -0.48
CCM2-217ENST00000492883 KLHL12Q53G59 568 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 CCDC92Q53HC0 331 aaPredicted RBP12.06□□□□□ -0.48
CCM2-217ENST00000492883 TMEM154Q6P9G4 183 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 UNQ6126/PRO20091Q6UXV3 157 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 VASH1Q7L8A9 365 aaPredicted RBP12.06□□□□□ -0.48
CCM2-217ENST00000492883 CPOQ8IVL8 374 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 LINC00346Q8IVM7 164 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 CBR4Q8N4T8 237 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 ZNF511Q8NB15 262 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 OR1F12Q8NHA8 337 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 IGFBPL1Q8WX77 278 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 TRMT61AQ96FX7 289 aaKnown RBP12.06□□□□□ -0.48
CCM2-217ENST00000492883 PERPQ96FX8 193 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 C9orf16Q9BUW7 83 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 HCAR1Q9BXC0 346 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 BCL2L14Q9BZR8 327 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 GRIP2Q9C0E4 1043 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 KCNG2Q9UJ96 466 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 LHFPL6Q9Y693 200 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 PMF1-BGLAPU3KQ54 211 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 ALPK2Q86TB3 2170 aa12.06□□□□□ -0.48
CCM2-217ENST00000492883 FBN2P35556 2912 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 NBPF19A0A087WUL8 3843 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 ZAR1LA6NP61 321 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 B9A039 149 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 OVOL3O00110 214 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 ZNF593O00488 134 aaPredicted RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 GPRIN2O60269 458 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 GLCEO94923 617 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 SPARCP09486 303 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 PCSK6P29122 969 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 EPHA2P29317 976 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 GSTT1P30711 240 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 GGT2P36268 569 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 POLR2IP36954 125 aaKnown RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 ALDH3A2P51648 485 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 RAD23AP54725 363 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 ATP5J2P56134 94 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 RPS7P62081 194 aaKnown RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 SNRPD2P62316 118 aaKnown RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 RAB35Q15286 201 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 ELFN2Q5R3F8 820 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 SLX4IPQ5VYV7 408 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 RGS7BPQ6MZT1 257 aaPredicted RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 SLC18B1Q6NT16 456 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 ARL9Q6T311 187 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 LYPD4Q6UWN0 246 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 ZBTB49Q6ZSB9 765 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 CXXC5Q7LFL8 322 aaKnown RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 LRRC75A-AS1Q8N1F1 130 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 OR1J1Q8NGS3 322 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 EME1Q96AY2 570 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 C4orf45Q96LM5 186 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 PITX2Q99697 317 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 CACNG6Q9BXT2 260 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 PLK3Q9H4B4 646 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 WDR76Q9H967 626 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 HINT3Q9NQE9 182 aaKnown RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 USE1Q9NZ43 259 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 H2AFY2Q9P0M6 372 aaPredicted RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 CYB5R1Q9UHQ9 305 aa12.05□□□□□ -0.48
CCM2-217ENST00000492883 GDF2Q9UK05 429 aaPredicted RBP12.05□□□□□ -0.48
CCM2-217ENST00000492883 CELSR2Q9HCU4 2923 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 OR6C6A6NF89 314 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 SYNGR3O43761 229 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 TLX2O43763 284 aaPredicted RBP12.04□□□□□ -0.48
CCM2-217ENST00000492883 ALPLP05186 524 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 RPS27P42677 84 aaKnown RBP12.04□□□□□ -0.48
CCM2-217ENST00000492883 PTH2RP49190 550 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 ENTPD1P49961 510 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 SELENOVP59797 346 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 EFNB3Q15768 340 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 HIST2H3PS2Q5TEC6 136 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 LINC01590Q5TEZ4 76 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 HIST2H3AQ71DI3 136 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 SLC7A6Q92536 515 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 MRPL24Q96A35 216 aaKnown RBP12.04□□□□□ -0.48
CCM2-217ENST00000492883 GABARAPL3Q9BY60 117 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 GSX2Q9BZM3 304 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 HDHD2Q9H0R4 259 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 ELOVL3Q9HB03 270 aa12.04□□□□□ -0.48
CCM2-217ENST00000492883 ZNF701Q9NV72 531 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms