RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SLC16A14Q7RTX9 510 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 LSRQ86X29 649 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 WDFY1Q8IWB7 410 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 CPEB3Q8NE35 698 aaKnown RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 GPR32P1Q8NGA4 272 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 OR56B2PQ8NGI1 322 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 OR6T1Q8NGN1 323 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 SGMS2Q8NHU3 365 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 FNDC8Q8TC99 324 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ADAMTS16Q8TE57 1224 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 YIPF5Q969M3 257 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 LRRC37BQ96QE4 947 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 WFDC6Q9BQY6 131 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 RBM4Q9BWF3 364 aaKnown RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 KCNN2Q9H2S1 579 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF665Q9H7R5 613 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 RNF121Q9H920 327 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 SIAEQ9HAT2 523 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 G6PC2Q9NQR9 355 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 TUBG2Q9NRH3 451 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 CYSLTR2Q9NS75 346 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 TAAR3PQ9P1P4 343 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 MYEF2Q9P2K5 600 aaKnown RBP7.8□□□□□ -1.16
HDAC3-212ENST00000492407 TRIM33Q9UPN9 1127 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 NDUFAF1Q9Y375 327 aa7.8□□□□□ -1.16
HDAC3-212ENST00000492407 PPIAL4EA0A075B759 164 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 PPIAL4CA0A0B4J2A2 164 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 IGHV1-69-2A0A0G2JMI3 117 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 A0A0G2JMP0 313 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 A0A0X1KG70 313 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 A0A1W2PRG6 482 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 HSBP1L1C9JCN9 74 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 C11orf98E9PRG8 122 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 PPIAL4DF5H284 164 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 M0R3H8 397 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 ATP5HO75947 161 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 VENTXO95231 258 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 MT-ND1P03886 318 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 MMP7P09237 267 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 TSPAN19P0C672 248 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 PPIAL4FP0DN26 164 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 THRBP10828 461 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 CD247P20963 164 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 CFPP27918 469 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 AQP1P29972 269 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 PCGF2P35227 344 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 POU3F4P49335 361 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 DAP3P51398 398 aaKnown RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 ALDH3A2P51648 485 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 CLRN1P58418 232 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 SLC3A1Q07837 685 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 PIN1Q13526 163 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 MAD2L1BPQ15013 274 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 CYP51A1Q16850 503 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 HFEQ30201 348 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 CCDC58Q4VC31 144 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 GPR139Q6DWJ6 353 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 FAHD2BQ6P2I3 314 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 DHDDSQ86SQ9 333 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 RBM15BQ8NDT2 890 aaKnown RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 OR4M2Q8NGB6 313 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 OR4K5Q8NGD3 323 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 FGFBP3Q8TAT2 258 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 RAB1CQ92928 201 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 MCHR2Q969V1 340 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 FAHD2AQ96GK7 314 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 TIMD4Q96H15 378 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 DIRC2Q96SL1 478 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 BCL7BQ9BQE9 202 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 EBF4Q9BQW3 602 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 WACQ9BTA9 647 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 KAT8Q9H7Z6 458 aaKnown RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 DECR2Q9NUI1 292 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 TREM2Q9NZC2 230 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 EIF3KQ9UBQ5 218 aaKnown RBP7.79□□□□□ -1.16
HDAC3-212ENST00000492407 SLC7A7Q9UM01 511 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 PCDHB10Q9UN67 800 aa7.79□□□□□ -1.16
HDAC3-212ENST00000492407 CPSF4LA6NMK7 179 aaKnown RBP7.78□□□□□ -1.16
HDAC3-212ENST00000492407 CLDN25C9JDP6 229 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 ANGPT2O15123 496 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 DEAF1O75398 565 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-212ENST00000492407 SERPINI2O75830 405 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 NCR1O76036 304 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 ATP6V1G2O95670 118 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 CLPTM1O96005 669 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 THY1P04216 161 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 LCKP06239 509 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 PATE4P0C8F1 98 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 ACADSP16219 412 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 DRD4P21917 467 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 CPT2P23786 658 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 GSTT1P30711 240 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 APLNRP35414 380 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 MAGEB1P43366 347 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 GSK3AP49840 483 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 UGT2B15P54855 530 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 CCL8P80075 99 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 ZNF718Q3SXZ3 478 aa7.78□□□□□ -1.16
HDAC3-212ENST00000492407 ZMAT1Q5H9K5 638 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms