RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MRPL39Q9NYK5 338 aaKnown RBP11.12□□□□□ -0.63
HMGN1-220ENST00000492280 COPZ2Q9P299 210 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 SRPK3Q9UPE1 567 aa11.12□□□□□ -0.63
HMGN1-220ENST00000492280 ALX3O95076 343 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 GNALP38405 381 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 DNASE1L1P49184 302 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 DCDP81605 110 aaKnown RBP11.11□□□□□ -0.63
HMGN1-220ENST00000492280 SLC22A6Q4U2R8 563 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 TEX30Q5JUR7 227 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 KCTD18Q6PI47 426 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-220ENST00000492280 H1FNTQ75WM6 255 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-220ENST00000492280 OR4D6Q8NGJ1 314 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 C11orf40Q8WZ69 217 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 MICU1Q9BPX6 476 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 PCED1AQ9H1Q7 454 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 PTGES2Q9H7Z7 377 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 G6PC2Q9NQR9 355 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 SERINC1Q9NRX5 453 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 SEMA5BQ9P283 1151 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 KLHL13Q9P2N7 655 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 B3GAT1Q9P2W7 334 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 IGHV3-15A0A0B4J1V0 119 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 CIB4A0PJX0 185 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 TMEM235A6NFC5 223 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 VSTM2BA6NLU5 285 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 OR6C76A6NM76 312 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 XRCC3O43542 346 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 OR2T1O43869 369 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 FOSL2P15408 326 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 PTGDSP41222 190 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 TSPAN5P62079 268 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 C17orf67Q0P5P2 114 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 ANKRD16Q6P6B7 361 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 CFAP77Q6ZQR2 320 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 MEIOBQ8N635 442 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 OR4S1Q8NGB4 309 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 TMEM234Q8WY98 164 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 B3GNT4Q9C0J1 378 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 CHST11Q9NPF2 352 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 OR52A1Q9UKL2 312 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 ZFHX4Q86UP3 3567 aa11.11□□□□□ -0.63
HMGN1-220ENST00000492280 RBBP9O75884 186 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 CCL4P13236 92 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF41P51814 821 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-220ENST00000492280 PER3P56645 1201 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 CCDC157Q569K6 752 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 CPEB2Q7Z5Q1 589 aaKnown RBP11.1□□□□□ -0.63
HMGN1-220ENST00000492280 GALNT16Q8N428 558 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 OR10S1Q8NGN2 331 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 STK35Q8TDR2 534 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF775Q96BV0 537 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-220ENST00000492280 FGGYQ96C11 551 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 C7orf50Q9BRJ6 194 aaKnown RBP11.1□□□□□ -0.63
HMGN1-220ENST00000492280 TINAGL1Q9GZM7 467 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-220ENST00000492280 GAREM1Q9H706 876 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 HEXA-AS1Q9H8Q6 139 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 MYOTQ9UBF9 498 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 POLR1DQ9Y2S0 133 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 TTC28Q96AY4 2481 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 A0A1W2PPC1 479 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 LIPT2A6NK58 231 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 TEX46H3BTG2 121 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 SLC17A2O00624 439 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 PHYHO14832 338 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 RGS11O94810 467 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 ECDO95905 644 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-220ENST00000492280 H2BFMP0C1H6 154 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 HTR2CP28335 458 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 NKPD1Q17RQ9 610 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 FGD2Q7Z6J4 655 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 COMMD2Q86X83 199 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 JSRP1Q96MG2 331 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-220ENST00000492280 PRMT8Q9NR22 394 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-220ENST00000492280 ETV7Q9Y603 341 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 R4GMQ9 66 aa11.1□□□□□ -0.63
HMGN1-220ENST00000492280 C5orf63A6NC05 138 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 H7C417 338 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 ICMTO60725 284 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 CRABP1P29762 137 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 CLDN6P56747 220 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 AP3S2P59780 193 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 ACY1Q03154 408 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 ROM1Q03395 351 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 PLPPR5Q32ZL2 321 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 ZBTB37Q5TC79 503 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 DCAF12L2Q5VW00 463 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 THOC7Q6I9Y2 204 aaKnown RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 GLDNQ6ZMI3 551 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 CREB3L2Q70SY1 520 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 TMED4Q7Z7H5 227 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 PPP1R3BQ86XI6 285 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 ZNF680Q8NEM1 530 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 OR13C9Q8NGT0 318 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 SAP25Q8TEE9 199 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 ADAT3Q96EY9 351 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-220ENST00000492280 RASL10BQ96S79 203 aa11.09□□□□□ -0.63
HMGN1-220ENST00000492280 C1QTNF6Q9BXI9 259 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms