RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZNF420Q8TAQ5 688 aaPredicted RBP11.04□□□□□ -0.64
USF1-206ENST00000491629 C10orf82Q8WW14 230 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 RAB40AQ8WXH6 277 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 SPDL1Q96EA4 605 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 C4orf45Q96LM5 186 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 FAM210AQ96ND0 272 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 SSBP3Q9BWW4 388 aaPredicted RBP11.04□□□□□ -0.64
USF1-206ENST00000491629 SLC19A3Q9BZV2 496 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 PCDHAC1Q9H158 963 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 EVA1AQ9H8M9 152 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 SMURF2Q9HAU4 748 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 GCM1Q9NP62 436 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 INIPQ9NRY2 104 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 OR5V1Q9UGF6 321 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 IL20RAQ9UHF4 553 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 SLC13A4Q9UKG4 626 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 PPP1R3CQ9UQK1 317 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 NOTCH3Q9UM47 2321 aa11.04□□□□□ -0.64
USF1-206ENST00000491629 TET2Q6N021 2002 aaPredicted RBP11.04□□□□□ -0.64
USF1-206ENST00000491629 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 MCIDASD6RGH6 385 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 TGDSO95455 350 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 HIST1H2ABP04908 130 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 CST2P09228 141 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 KITLGP21583 273 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 PPIBP23284 216 aaKnown RBP11.03□□□□□ -0.64
USF1-206ENST00000491629 LAPTM4AQ15012 233 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 RUNDC3AQ59EK9 446 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 ZNF362Q5T0B9 420 aaPredicted RBP11.03□□□□□ -0.64
USF1-206ENST00000491629 EPGNQ6UW88 154 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 LRRN1Q6UXK5 716 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 HIST3H2AQ7L7L0 130 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 HDXQ7Z353 690 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 KLBQ86Z14 1044 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 OR4F5Q8NH21 305 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 HIST1H2ACQ93077 130 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 TAMM41Q96BW9 452 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 OR2V2Q96R30 315 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 KCNN2Q9H2S1 579 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 IL19Q9UHD0 177 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 STARD10Q9Y365 291 aa11.03□□□□□ -0.64
USF1-206ENST00000491629 COL7A1Q02388 2944 aa11.02□□□□□ -0.64
USF1-206ENST00000491629 KIR2DS1A0A191URI9 304 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 TMEM120BA0PK00 339 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 M0QZ24 198 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 OR7A10O76100 309 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 CYB5R3P00387 301 aaPredicted RBP11.02□□□□□ -0.65
USF1-206ENST00000491629 MT-ND1P03886 318 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 MELTFP08582 738 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 TNFRSF1AP19438 455 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 PMELP40967 661 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 DAP3P51398 398 aaKnown RBP11.02□□□□□ -0.65
USF1-206ENST00000491629 TAF11Q15544 211 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 ZMAT1Q5H9K5 638 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 FAM201AQ5SY85 155 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 RUSC1-AS1Q66K80 236 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 FITM2Q8N6M3 262 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 LINC01006Q8NI28 216 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 TMEM255BQ8WV15 326 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 LIPHQ8WWY8 451 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 CMBLQ96DG6 245 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 EBF4Q9BQW3 602 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 TMEM246Q9BRR3 403 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 CDADC1Q9BWV3 514 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 CENPHQ9H3R5 247 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 NANOGQ9H9S0 305 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 ELOVL3Q9HB03 270 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 CCDC167Q9P0B6 97 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 ANGPT4Q9Y264 503 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 TIMM10BQ9Y5J6 103 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 RYR3Q15413 4870 aa11.02□□□□□ -0.65
USF1-206ENST00000491629 C22orf46C9J442 243 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 H0YL77 283 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 RPS2P15880 293 aaKnown RBP11.01□□□□□ -0.65
USF1-206ENST00000491629 FUT4P22083 530 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 PROK1P58294 105 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 FGF12P61328 243 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 HOXA4Q00056 320 aaPredicted RBP11.01□□□□□ -0.65
USF1-206ENST00000491629 CD47Q08722 323 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 WDR93Q6P2C0 686 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 LYPD2Q6UXB3 125 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 UNQ6126/PRO20091Q6UXV3 157 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 ZNF841Q6ZN19 808 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 MUC20Q8N307 709 aaPredicted RBP11.01□□□□□ -0.65
USF1-206ENST00000491629 C11orf65Q8NCR3 313 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 SLC7A6Q92536 515 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 HAVCR1Q96D42 359 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 NUDT16L1Q9BRJ7 211 aaKnown RBP11.01□□□□□ -0.65
USF1-206ENST00000491629 TXNIPQ9H3M7 391 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 MAN2C1Q9NTJ4 1040 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 TBCCD1Q9NVR7 557 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 RAB21Q9UL25 225 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 USH1CQ9Y6N9 552 aa11.01□□□□□ -0.65
USF1-206ENST00000491629 IGHV3-64DA0A0J9YX35 117 aa11□□□□□ -0.65
USF1-206ENST00000491629 NPIPB13A6NJU9 1138 aa11□□□□□ -0.65
USF1-206ENST00000491629 EVPLLA8MZ36 301 aa11□□□□□ -0.65
USF1-206ENST00000491629 NPIPB4C9JG80 1138 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms