RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 HRGP04196 525 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 CTSBP07858 339 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 FGF5P12034 268 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 CSF2RBP32927 897 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 MPLP40238 635 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 RAG2P55895 527 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SLC36A2Q495M3 483 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 STEAP1BQ6NZ63 245 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 LINC00114Q6XXX2 140 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 KCTD9Q7L273 389 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 C17orf82Q86X59 251 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 PLPP7Q8NBV4 271 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 OR5M1Q8NGP8 315 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 OR52I2Q8NH67 350 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 PBOV1Q9GZY1 135 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 METTL9Q9H1A3 318 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 MRM2Q9UI43 246 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 COLQQ9Y215 455 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 NOSIPQ9Y314 301 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SF3B6Q9Y3B4 125 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 OBSL1O75147 1896 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 TCF20Q9UGU0 1960 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 OR2AT4A6NND4 320 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 GSTZ1O43708 216 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 FADS1O60427 444 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SLC22A5O76082 557 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 DXOO77932 396 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 LALBAP00709 142 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 FCER2P06734 321 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 THBS2P35442 1172 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 KIR2DL3P43628 341 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 TAS2R46P59540 309 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 JMJD6Q6NYC1 403 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 TRAPPC6BQ86SZ2 158 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ACBD4Q8NC06 268 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 DUSP18Q8NEJ0 188 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SLC6A7Q99884 636 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ZNF426Q9BUY5 554 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 TMEM59Q9BXS4 323 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ZCCHC4Q9H5U6 513 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 FAM86C1Q9NVL1 165 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 OCIAD1Q9NX40 245 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ATG2BQ96BY7 2078 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 LIPT2A6NK58 231 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 B4E171 279 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 GOSR2O14653 212 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 OIP5O43482 229 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 HTR3BO95264 441 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 APLNRP35414 380 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 TSPAN7P41732 249 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 SRP9P49458 86 aaKnown RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 MC2RQ01718 297 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 ZMYND11Q15326 602 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 WDR38Q5JTN6 314 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 CLVS2Q5SYC1 327 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 GSG1LQ6UXU4 331 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 LRRC18Q8N456 261 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 BPIFB2Q8N4F0 458 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 TMEM178AQ8NBL3 297 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 ADPRHL1Q8NDY3 354 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 FAM71CQ8NEG0 241 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 DNAAF1Q8NEP3 725 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 CASTOR1Q8WTX7 329 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 C11orf40Q8WZ69 217 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 UBL7Q96S82 380 aaPredicted RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 VRK1Q99986 396 aaPredicted RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 TMEM74BQ9NUR3 256 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 GDF2Q9UK05 429 aaPredicted RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 COPS3Q9UNS2 423 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 G3V3Y1 287 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 HOXA6P31267 233 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 DLSTP36957 453 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 HTR5AP47898 357 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 FAPQ12884 760 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 INSL4Q14641 139 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 CDK10Q15131 360 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 C2orf76Q3KRA6 126 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 PRSS45Q7RTY3 260 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 C12orf45Q8N5I9 185 aaPredicted RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 ZNF565Q8N9K5 539 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 CSNK2A3Q8NEV1 391 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 OR5L1Q8NGL2 311 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 RASL10BQ96S79 203 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 TWSG1Q9GZX9 223 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 KLHL13Q9P2N7 655 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 SLC22A13Q9Y226 551 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 C13orf42A0A1B0GVH6 325 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 SERPINA5P05154 406 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 GP1BAP07359 652 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 UQCRC1P31930 480 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 UBE2NP61088 152 aaKnown RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 RPS4XP62701 263 aaKnown RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 CXADRP78310 365 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 PMPCAQ10713 525 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 MRPL21Q7Z2W9 205 aaKnown RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 TCTE3Q8IZS6 198 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 OR6X1Q8NH79 312 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 RAB3CQ96E17 227 aa6.6□□□□□ -1.35
NPHP3-208ENST00000490993 PPIL3Q9H2H8 161 aaKnown RBP6.6□□□□□ -1.35
NPHP3-208ENST00000490993 HRASLSQ9HDD0 168 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms