RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LOXL1Q08397 574 aaPredicted RBP2.27□□□□□ -2.05
CD46-216ENST00000490278 MOBPQ13875 183 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 QPRTQ15274 297 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 IRF4Q15306 451 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 SF3A2Q15428 464 aaKnown RBP2.27□□□□□ -2.05
CD46-216ENST00000490278 CHRNA6Q15825 494 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 ZNF726P1Q15940 193 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 FAM78AQ5JUQ0 283 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 METTL21CQ5VZV1 264 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 METAP1DQ6UB28 335 aaPredicted RBP2.27□□□□□ -2.05
CD46-216ENST00000490278 NTM-AS1Q6ZSK4 140 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 WDR86Q86TI4 376 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 CTAGE6Q86UF2 777 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 CMTM1Q8IZ96 169 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 ZFP41Q8N8Y5 198 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 MRGPRFQ96AM1 343 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 ZNF382Q96SR6 550 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 MICU1Q9BPX6 476 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 C20orf24Q9BUV8 137 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 FAM192AQ9GZU8 254 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 NEUROG2Q9H2A3 272 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 NTN4Q9HB63 628 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 NEK6Q9HC98 313 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 TMEM9BQ9NQ34 198 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 SIRT7Q9NRC8 400 aa2.27□□□□□ -2.05
CD46-216ENST00000490278 COL4A4P53420 1690 aaPredicted RBP2.27□□□□□ -2.05
CD46-216ENST00000490278 ADAMTS13Q76LX8 1427 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 CAMTA1Q9Y6Y1 1673 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 IGLV1-36A0A0B4J1U3 117 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 TMEM223A0PJW6 202 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 RAD51BO15315 384 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 RBFOX2O43251 390 aaKnown RBP eCLIP2.26□□□□□ -2.053e-6■■□□□ 11.7
CD46-216ENST00000490278 CHST1O43916 411 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 H6PDO95479 791 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 MUC1P15941 1255 aaPredicted RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 EIF2S2P20042 333 aaKnown RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 TCN2P20062 427 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 NPY1RP25929 384 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 RGS8P57771 180 aaPredicted RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 CDH17Q12864 832 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 SELENBP1Q13228 472 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 ORMDL2Q53FV1 153 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 UBE2UQ5VVX9 321 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 PRMT9Q6P2P2 845 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 MBOAT1Q6ZNC8 495 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 CENPQQ7L2Z9 268 aaPredicted RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 BBS5Q8N3I7 341 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 C15orf40Q8WUR7 153 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 CAPSLQ8WWF8 208 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 TGS1Q96RS0 853 aaKnown RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 CHP1Q99653 195 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 LZTS2Q9BRK4 669 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 RSPO3Q9BXY4 272 aaPredicted RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 SPNS1Q9H2V7 528 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 ZNF160Q9HCG1 818 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 DDX19AQ9NUU7 478 aaKnown RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 CCDC59Q9P031 241 aaKnown RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 TRMT112Q9UI30 125 aaKnown RBP2.26□□□□□ -2.05
CD46-216ENST00000490278 VANGL2Q9ULK5 521 aa2.26□□□□□ -2.05
CD46-216ENST00000490278 NINLQ9Y2I6 1382 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 TRBV9A0A0B4J1U6 114 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 SMKR1H3BMG3 65 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 EIF3HO15372 352 aaKnown RBP eCLIP2.25□□□□□ -2.05
CD46-216ENST00000490278 EIF4E2O60573 245 aaKnown RBP2.25□□□□□ -2.05
CD46-216ENST00000490278 CLDN11O75508 207 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 SERPINE2P07093 398 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CD3GP09693 182 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 OR56A5P0C7T3 313 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CT45A6P0DMU7 189 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CT45A5P0DMU8 189 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CT45A7P0DMV0 189 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 MYL2P10916 166 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 GGT1P19440 569 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 DTYMKP23919 212 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 SSTR5P35346 364 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 C21orf59P57076 290 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 EIF3EP60228 445 aaKnown RBP2.25□□□□□ -2.05
CD46-216ENST00000490278 UBE2NP61088 152 aaKnown RBP2.25□□□□□ -2.05
CD46-216ENST00000490278 SP4Q02446 784 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 RCAN2Q14206 197 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 RCN1Q15293 331 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 PGGHGQ32M88 737 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CT45A1Q5HYN5 189 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 ZNF684Q5T5D7 378 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CMC1Q7Z7K0 106 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CALHM1Q8IU99 346 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 ZNF561Q8N587 486 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 METTL13Q8N6R0 699 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CT45A3Q8NHU0 189 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 COQ8AQ8NI60 647 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 FAM81AQ8TBF8 368 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 PIFOQ8TCI5 191 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 TMEM230Q96A57 120 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 MCUR1Q96AQ8 359 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 EEF1AKMT3Q96AZ1 226 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 ECHDC3Q96DC8 303 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 CAMK2N2Q96S95 79 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 TIMM17AQ99595 171 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 TMEM185BQ9H7F4 350 aa2.25□□□□□ -2.05
CD46-216ENST00000490278 TMEM165Q9HC07 324 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms