RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 MYOZ1Q9NP98 299 aaPredicted RBP16.41■□□□□ 0.22
EPHB4-207ENST00000489808 RPRD1BQ9NQG5 326 aaKnown RBP16.41■□□□□ 0.22
EPHB4-207ENST00000489808 CSPG4Q6UVK1 2322 aa16.41■□□□□ 0.22
EPHB4-207ENST00000489808 IGLV3-9A0A075B6K5 115 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 A0A096LNT2 108 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 GNGT2O14610 69 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 GPANK1O95872 356 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 SLC25A16P16260 332 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 COX10Q12887 443 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 AQP6Q13520 282 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 MAD2L1BPQ15013 274 aaPredicted RBP16.4■□□□□ 0.22
EPHB4-207ENST00000489808 ZNF362Q5T0B9 420 aaPredicted RBP16.4■□□□□ 0.22
EPHB4-207ENST00000489808 UNQ6126/PRO20091Q6UXV3 157 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 TMEM179BQ7Z7N9 219 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 C1orf174Q8IYL3 243 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 ZNF101Q8IZC7 436 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 PAPD5Q8NDF8 572 aaKnown RBP16.4■□□□□ 0.22
EPHB4-207ENST00000489808 SDR9C7Q8NEX9 313 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 OR8D4Q8NGM9 314 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 C4orf45Q96LM5 186 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 TSSK6Q9BXA6 273 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 RACGAP1Q9H0H5 632 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 TAAR3PQ9P1P4 343 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 ASH2LQ9UBL3 628 aa16.4■□□□□ 0.22
EPHB4-207ENST00000489808 NDRG4Q9ULP0 352 aaKnown RBP16.4■□□□□ 0.22
EPHB4-207ENST00000489808 SETD2Q9BYW2 2564 aaPredicted RBP16.4■□□□□ 0.22
EPHB4-207ENST00000489808 A0A1W2PPW3 197 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 LOC390937A0A1W2PQ73 354 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 NDUFS8O00217 210 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 SGCEO43556 437 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 ICMTO60725 284 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 TP53P04637 393 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-207ENST00000489808 GAAP10253 952 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 DAOP14920 347 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 KLF3P57682 345 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-207ENST00000489808 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.39■□□□□ 0.21
EPHB4-207ENST00000489808 DBPQ10586 325 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-207ENST00000489808 CCDC92Q53HC0 331 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-207ENST00000489808 VASH1Q7L8A9 365 aaPredicted RBP16.39■□□□□ 0.21
EPHB4-207ENST00000489808 LNX2Q8N448 690 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 ICA1LQ8NDH6 482 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 SLCO4A1Q96BD0 722 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 FEVQ99581 238 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 NIPSNAP1Q9BPW8 284 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 TPK1Q9H3S4 243 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 YY1AP1Q9H869 796 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 ELOVL3Q9HB03 270 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 SLCO1C1Q9NYB5 712 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 PLEK2Q9NYT0 353 aa16.39■□□□□ 0.21
EPHB4-207ENST00000489808 ARRDC5A6NEK1 342 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 VWC2LB2RUY7 222 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 DOK2O60496 412 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 FKBP6O75344 327 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 NGFP01138 241 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 TFP02787 698 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 GLO1Q04760 184 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 KRTAP1-1Q07627 177 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 LOXL1Q08397 574 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-207ENST00000489808 CARTPTQ16568 116 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 MOGQ16653 247 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 MEP1BQ16820 701 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 ZNF718Q3SXZ3 478 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 ARL9Q6T311 187 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 SLC26A10Q8NG04 563 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 UBASH3BQ8TF42 649 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 MARS2Q96GW9 593 aaKnown RBP16.38■□□□□ 0.21
EPHB4-207ENST00000489808 MMADHCQ9H3L0 296 aaPredicted RBP16.38■□□□□ 0.21
EPHB4-207ENST00000489808 TBC1D23Q9NUY8 699 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 GPR160Q9UJ42 338 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 BAIAP2Q9UQB8 552 aa16.38■□□□□ 0.21
EPHB4-207ENST00000489808 RER1O15258 196 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 SOX14O95416 240 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 IGHV3-13P01766 116 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 NAT2P11245 290 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 HTR5AP47898 357 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 ERFP50548 548 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 PPP1CBP62140 327 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 HIST1H3AP68431 136 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 CBX1P83916 185 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 TEKQ02763 1124 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 NKPD1Q17RQ9 610 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 HIST2H3PS2Q5TEC6 136 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 HIST2H3AQ71DI3 136 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.37■□□□□ 0.21
EPHB4-207ENST00000489808 ZNF786Q8N393 782 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 CYB561A3Q8NBI2 242 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 GJC3Q8NFK1 279 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 OR2T33Q8NG76 320 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 OR4Q3Q8NH05 313 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 OR1F12Q8NHA8 337 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 ABHD4Q8TB40 342 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 SLC25A40Q8TBP6 338 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 FN3KQ9H479 309 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 HINT3Q9NQE9 182 aaKnown RBP16.37■□□□□ 0.21
EPHB4-207ENST00000489808 ARMC1Q9NVT9 282 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 PDP1Q9P0J1 537 aaPredicted RBP16.37■□□□□ 0.21
EPHB4-207ENST00000489808 DNAJB9Q9UBS3 223 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 LHFPL6Q9Y693 200 aa16.37■□□□□ 0.21
EPHB4-207ENST00000489808 ANK3Q12955 4377 aaKnown RBP16.36■□□□□ 0.21
EPHB4-207ENST00000489808 OR6C6A6NF89 314 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms