RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 PPP1R3CQ9UQK1 317 aa14.25□□□□□ -0.13
TOP3B-217ENST00000489581 MDFIC2A0A1B0GVS7 189 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 GMNCA6NCL1 334 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 GSTM3P21266 225 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 MDH2P40926 338 aaKnown RBP14.24□□□□□ -0.13
TOP3B-217ENST00000489581 SRSF4Q08170 494 aaKnown RBP14.24□□□□□ -0.13
TOP3B-217ENST00000489581 PIN1Q13526 163 aaPredicted RBP14.24□□□□□ -0.13
TOP3B-217ENST00000489581 NFYCQ13952 458 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 ENDOGQ14249 297 aaKnown RBP14.24□□□□□ -0.13
TOP3B-217ENST00000489581 VMACQ2NL98 169 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 ALG10Q5BKT4 473 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 C16orf87Q6PH81 154 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 IGFN1Q86VF2 1251 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 DPP10Q8N608 796 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 LRRC8CQ8TDW0 803 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 RASSF5Q8WWW0 418 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 CMBLQ96DG6 245 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 MAN2C1Q9NTJ4 1040 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 MED31Q9Y3C7 131 aa14.24□□□□□ -0.13
TOP3B-217ENST00000489581 NPIPB13A6NJU9 1138 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 CEACAM18A8MTB9 384 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 NPIPB4C9JG80 1138 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 TMEM178BH3BS89 294 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 ANGPT2O15123 496 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 PIP5K1CO60331 668 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 ZNF205O95201 554 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 OR5F1O95221 314 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 IGF2P01344 180 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 SCG5P05408 212 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 WNT2P09544 360 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 GZMMP51124 257 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 CTXN1P60606 82 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 RPL27P61353 136 aaKnown RBP14.23□□□□□ -0.13
TOP3B-217ENST00000489581 CCDC80Q76M96 950 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 THOC1Q96FV9 657 aaKnown RBP14.23□□□□□ -0.13
TOP3B-217ENST00000489581 OR2V2Q96R30 315 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 SSBP3Q9BWW4 388 aaPredicted RBP14.23□□□□□ -0.13
TOP3B-217ENST00000489581 RABEP2Q9H5N1 569 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 IL19Q9UHD0 177 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 NDRG4Q9ULP0 352 aaKnown RBP14.23□□□□□ -0.13
TOP3B-217ENST00000489581 LRCH1Q9Y2L9 728 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 STARD10Q9Y365 291 aa14.23□□□□□ -0.13
TOP3B-217ENST00000489581 PRKDCP78527 4128 aaKnown RBP14.22□□□□□ -0.13
TOP3B-217ENST00000489581 TRAV40A0A0B4J280 105 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 PLATP00750 562 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 KITLGP21583 273 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 MSR1P21757 451 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 OR1E2P47887 323 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 ERFP50548 548 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 PAX2Q02962 417 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 BTNL3Q6UXE8 466 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 FOXL2NBQ6ZUU3 175 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 C9orf139Q6ZV77 190 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 MUC20Q8N307 709 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-217ENST00000489581 NPEPL1Q8NDH3 523 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 ZNF420Q8TAQ5 688 aaPredicted RBP14.22□□□□□ -0.13
TOP3B-217ENST00000489581 EMC7Q9NPA0 242 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 TBCCD1Q9NVR7 557 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 IL20RAQ9UHF4 553 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 HIF3AQ9Y2N7 669 aa14.22□□□□□ -0.13
TOP3B-217ENST00000489581 C12orf71A8MTZ7 269 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 SURF4O15260 269 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 HOXA3O43365 443 aaPredicted RBP14.21□□□□□ -0.13
TOP3B-217ENST00000489581 DOK2O60496 412 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 KNG1P01042 644 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 IFI30P13284 250 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 RPS2P15880 293 aaKnown RBP14.21□□□□□ -0.13
TOP3B-217ENST00000489581 HTR5AP47898 357 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 C1orf94Q6P1W5 598 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 LRRN1Q6UXK5 716 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 SYT9Q86SS6 491 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 MICU2Q8IYU8 434 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 OR5AS1Q8N127 324 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 KIR3DL3Q8N743 410 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 ATG16L2Q8NAA4 619 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 FNDC8Q8TC99 324 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 RAB40AQ8WXH6 277 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 UPRTQ96BW1 309 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 HAVCR1Q96D42 359 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 GCM1Q9NP62 436 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 POLE4Q9NR33 117 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 TNFRSF19Q9NS68 423 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 PDP1Q9P0J1 537 aaPredicted RBP14.21□□□□□ -0.13
TOP3B-217ENST00000489581 BAG5Q9UL15 447 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 MMP24Q9Y5R2 645 aa14.21□□□□□ -0.13
TOP3B-217ENST00000489581 TRAV27A0A087WT01 109 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 IGHV2-70DA0A0C4DH43 119 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 A0A0G2JK05 382 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 H7C1C5 153 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 CYB5R3P00387 301 aaPredicted RBP14.2□□□□□ -0.14
TOP3B-217ENST00000489581 PPIAL4GP0DN37 164 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 COX5BP10606 129 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 TUBG1P23258 451 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 MMP16P51512 607 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 LCN6P62502 163 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 GNB2P62879 340 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 DEFB112Q30KQ8 113 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 BRD3OSQ6XYD6 125 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 KLBQ86Z14 1044 aa14.2□□□□□ -0.14
TOP3B-217ENST00000489581 POU5F2Q8N7G0 328 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms