RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 CENPOQ9BU64 300 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 SIAEQ9HAT2 523 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 UPB1Q9UBR1 384 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 LRP12Q9Y561 859 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 FIGNL2A6NMB9 653 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 ZNF254O75437 659 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 SLC3A1Q07837 685 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 NFATC3Q12968 1075 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 GUSBP1Q15486 140 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 SOWAHCQ53LP3 525 aaPredicted RBP19.06■□□□□ 0.64
SMC4-221ENST00000489573 FAM27BQ5VT28 67 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 OR2A2Q6IF42 318 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 OR7E24Q6IFN5 339 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 DEGS2Q6QHC5 323 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 CFAP77Q6ZQR2 320 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 FAM57AQ8TBR7 257 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 RPS4Y2Q8TD47 263 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 SNRNP40Q96DI7 357 aaKnown RBP19.06■□□□□ 0.64
SMC4-221ENST00000489573 PGLYRP3Q96LB9 341 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 C12orf49Q9H741 205 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 EMC9Q9Y3B6 208 aa19.06■□□□□ 0.64
SMC4-221ENST00000489573 MGAQ8IWI9 3026 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 TRBV2A0A0J9YWF9 115 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 HLA-DPB1P04440 258 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 CD1AP06126 327 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 ABOP16442 354 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 PCSK6P29122 969 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 TGFBR1P36897 503 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 OPRL1P41146 370 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 OR3A2P47893 321 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 GDI2P50395 445 aaKnown RBP19.05■□□□□ 0.64
SMC4-221ENST00000489573 KLRB1Q12918 225 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 TRAM1Q15629 374 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 CD200R1LQ6Q8B3 271 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 FAM214BQ7L5A3 538 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 CD163Q86VB7 1156 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 GCNT2Q8N0V5 402 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 UBE2J2Q8N2K1 259 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 NDNFQ8TB73 568 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 TRMT61AQ96FX7 289 aaKnown RBP19.05■□□□□ 0.64
SMC4-221ENST00000489573 COQ7Q99807 217 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 DCUN1D5Q9BTE7 237 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 SLC25A18Q9H1K4 315 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 CENPMQ9NSP4 180 aa19.05■□□□□ 0.64
SMC4-221ENST00000489573 TRDV1A0A1B0GX56 115 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 H2BFMP0C1H6 154 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 B4GALT1P15291 398 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 NANOS3P60323 173 aaKnown RBP19.04■□□□□ 0.64
SMC4-221ENST00000489573 FABP5Q01469 135 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 ALKBH1Q13686 389 aaKnown RBP19.04■□□□□ 0.64
SMC4-221ENST00000489573 C1orf185Q5T7R7 199 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 ABHD12BQ7Z5M8 362 aaPredicted RBP19.04■□□□□ 0.64
SMC4-221ENST00000489573 LRRC18Q8N456 261 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 KBTBD8Q8NFY9 601 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 OR10S1Q8NGN2 331 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 HSD17B8Q92506 261 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 RNF167Q9H6Y7 350 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 PRSS50Q9UI38 385 aa19.04■□□□□ 0.64
SMC4-221ENST00000489573 MBD3L4A6NDZ8 208 aaPredicted RBP19.03■□□□□ 0.64
SMC4-221ENST00000489573 MBD3L3A6NE82 208 aaPredicted RBP19.03■□□□□ 0.64
SMC4-221ENST00000489573 MBD3L5A6NJ08 208 aaPredicted RBP19.03■□□□□ 0.64
SMC4-221ENST00000489573 ZNF878C9JN71 531 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 RER1O15258 196 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 RGS9O75916 674 aaPredicted RBP19.03■□□□□ 0.64
SMC4-221ENST00000489573 CST2P09228 141 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 GALP22466 123 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 NRN1LQ496H8 165 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 PRR30Q53SZ7 412 aaPredicted RBP19.03■□□□□ 0.64
SMC4-221ENST00000489573 FDX2Q6P4F2 183 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 USP43Q70EL4 1123 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 RHOUQ7L0Q8 258 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 SLC22A24Q8N4F4 322 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 GJC3Q8NFK1 279 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 MBD3L2Q8NHZ7 208 aaPredicted RBP19.03■□□□□ 0.64
SMC4-221ENST00000489573 GHSRQ92847 366 aa19.03■□□□□ 0.64
SMC4-221ENST00000489573 TXNL4BQ9NX01 149 aaKnown RBP19.03■□□□□ 0.64
SMC4-221ENST00000489573 GPRIN2O60269 458 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 FAPQ12884 760 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 FBXW9Q5XUX1 488 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 ZNF544Q6NX49 715 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 ZNF813Q6ZN06 617 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.02■□□□□ 0.64
SMC4-221ENST00000489573 MS4A15Q8N5U1 240 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 OR2G2Q8NGZ5 317 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 HDHD5Q9BXW7 423 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 PNRC2Q9NPJ4 139 aaKnown RBP19.02■□□□□ 0.64
SMC4-221ENST00000489573 ASF1BQ9NVP2 202 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 MALT1Q9UDY8 824 aa19.02■□□□□ 0.64
SMC4-221ENST00000489573 GABRPO00591 440 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 FARS2O95363 451 aaKnown RBP19.02■□□□□ 0.63
SMC4-221ENST00000489573 ZNF182P17025 639 aaPredicted RBP19.02■□□□□ 0.63
SMC4-221ENST00000489573 FGF9P31371 208 aaPredicted RBP19.02■□□□□ 0.63
SMC4-221ENST00000489573 UGT2B10P36537 528 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 HIST1H3AP68431 136 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 ARF1P84077 181 aaKnown RBP19.02■□□□□ 0.63
SMC4-221ENST00000489573 HIST2H3PS2Q5TEC6 136 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 RTL6Q6ICC9 239 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 KLHL24Q6TFL4 600 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 TFAP2EQ6VUC0 442 aa19.02■□□□□ 0.63
SMC4-221ENST00000489573 HIST2H3AQ71DI3 136 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms