RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 NPTX1Q15818 432 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 ENTPD8Q5MY95 495 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 KPRPQ5T749 579 aaPredicted RBP13.46□□□□□ -0.25
USP48-210ENST00000489108 ATG16L2Q8NAA4 619 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 SMYD1Q8NB12 490 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 OR8B3Q8NGG8 313 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 OR8B2Q96RD0 313 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 SDR39U1Q9NRG7 319 aaPredicted RBP13.46□□□□□ -0.25
USP48-210ENST00000489108 SLAMF8Q9P0V8 285 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 TIMM10BQ9Y5J6 103 aa13.46□□□□□ -0.25
USP48-210ENST00000489108 TRPC5OSA6NMA1 111 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 ABHD16AO95870 558 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 IGHV4-59P01825 116 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 SFTPBP07988 381 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 KITP10721 976 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 SLC6A2P23975 617 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 PITPNBP48739 271 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 ERFP50548 548 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 FAM201AQ5SY85 155 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 ARMC4Q5T2S8 1044 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 SAMD5Q5TGI4 173 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 SLC25A47Q6Q0C1 308 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 ARL9Q6T311 187 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 LYPD2Q6UXB3 125 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 Q6ZSV7 163 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 RBM45Q8IUH3 476 aaKnown RBP13.45□□□□□ -0.26
USP48-210ENST00000489108 MSRB3Q8IXL7 192 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 GOLGA6L1Q8N7Z2 621 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 ZSCAN4Q8NAM6 433 aaPredicted RBP13.45□□□□□ -0.26
USP48-210ENST00000489108 OR6T1Q8NGN1 323 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 C10orf82Q8WW14 230 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 HDAC2Q92769 488 aaKnown RBP13.45□□□□□ -0.26
USP48-210ENST00000489108 HAVCR1Q96D42 359 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 EVA1AQ9H8M9 152 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 SMURF2Q9HAU4 748 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 INIPQ9NRY2 104 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 CLN8Q9UBY8 286 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 SLC7A7Q9UM01 511 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 STARD10Q9Y365 291 aa13.45□□□□□ -0.26
USP48-210ENST00000489108 TET2Q6N021 2002 aaPredicted RBP13.45□□□□□ -0.26
USP48-210ENST00000489108 IGHV3-64DA0A0J9YX35 117 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 CENPVL3A0A0U1RRI6 287 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 C22orf46C9J442 243 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 CST2P09228 141 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 AQP2P41181 271 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 DAP3P51398 398 aaKnown RBP13.44□□□□□ -0.26
USP48-210ENST00000489108 CD47Q08722 323 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 MPP2Q14168 576 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 DUSP7Q16829 419 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 ZNF404Q494X3 552 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 WDR25Q64LD2 544 aaPredicted RBP13.44□□□□□ -0.26
USP48-210ENST00000489108 NLRC3Q7RTR2 1065 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 HDDC2Q7Z4H3 204 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 TSPYL5Q86VY4 417 aaPredicted RBP13.44□□□□□ -0.26
USP48-210ENST00000489108 VANGL1Q8TAA9 524 aaPredicted RBP13.44□□□□□ -0.26
USP48-210ENST00000489108 ADAMTS16Q8TE57 1224 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 MEPEQ9NQ76 525 aaPredicted RBP13.44□□□□□ -0.26
USP48-210ENST00000489108 ACOXLQ9NUZ1 547 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 TBCCD1Q9NVR7 557 aa13.44□□□□□ -0.26
USP48-210ENST00000489108 P2RY10O00398 339 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 PIP5K1CO60331 668 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 FUT1P19526 365 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 CFHR2P36980 270 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 IER3P46695 156 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 ZNF841Q6ZN19 808 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 REC114Q7Z4M0 266 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 OR5AS1Q8N127 324 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 NPEPL1Q8NDH3 523 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 GPR32P1Q8NGA4 272 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 OR4D11Q8NGI4 311 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 MOSPD2Q8NHP6 518 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 MRAPQ8TCY5 172 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 GATAD2BQ8WXI9 593 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.43□□□□□ -0.26
USP48-210ENST00000489108 MEGF10Q96KG7 1140 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 MAGEB18Q96M61 343 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 TBX15Q96SF7 602 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 ZNF426Q9BUY5 554 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 C16orf95Q9H693 158 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 TMEM38AQ9H6F2 299 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.43□□□□□ -0.26
USP48-210ENST00000489108 ANGPT4Q9Y264 503 aa13.43□□□□□ -0.26
USP48-210ENST00000489108 TRAPPC13A5PLN9 417 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 UBDO15205 165 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 ENSAO43768 121 aaKnown RBP13.42□□□□□ -0.26
USP48-210ENST00000489108 TOX4O94842 621 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 TUBG1P23258 451 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 PMELP40967 661 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 PCBD1P61457 104 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 ENDOGQ14249 297 aaKnown RBP13.42□□□□□ -0.26
USP48-210ENST00000489108 LAPTM4AQ15012 233 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 LRIF1Q5T3J3 769 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 MOGAT3Q86VF5 341 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 PTOV1Q86YD1 416 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 CLDN22Q8N7P3 220 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 OR10AD1Q8NGE0 317 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 PTP4A1Q93096 173 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 MPP4Q96JB8 637 aa13.42□□□□□ -0.26
USP48-210ENST00000489108 MAELQ96JY0 434 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms