RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 GPA33Q99795 319 aa2.55□□□□□ -2
CALD1-221ENST00000489019 LMF2Q9BU23 707 aaKnown RBP2.55□□□□□ -2
CALD1-221ENST00000489019 TMED9Q9BVK6 235 aa2.55□□□□□ -2
CALD1-221ENST00000489019 RSPO3Q9BXY4 272 aaPredicted RBP2.55□□□□□ -2
CALD1-221ENST00000489019 NDEL1Q9GZM8 345 aa2.55□□□□□ -2
CALD1-221ENST00000489019 SLIRPQ9GZT3 109 aaKnown RBP2.55□□□□□ -2
CALD1-221ENST00000489019 OR51V1Q9H2C8 321 aa2.55□□□□□ -2
CALD1-221ENST00000489019 OR52D1Q9H346 318 aa2.55□□□□□ -2
CALD1-221ENST00000489019 TPK1Q9H3S4 243 aa2.55□□□□□ -2
CALD1-221ENST00000489019 UCK1Q9HA47 277 aa2.55□□□□□ -2
CALD1-221ENST00000489019 HHATLQ9HCP6 504 aa2.55□□□□□ -2
CALD1-221ENST00000489019 FGF20Q9NP95 211 aaPredicted RBP2.55□□□□□ -2
CALD1-221ENST00000489019 ISYNA1Q9NPH2 558 aa2.55□□□□□ -2
CALD1-221ENST00000489019 NOX4Q9NPH5 578 aa2.55□□□□□ -2
CALD1-221ENST00000489019 FBXO8Q9NRD0 319 aa2.55□□□□□ -2
CALD1-221ENST00000489019 CUTCQ9NTM9 273 aa2.55□□□□□ -2
CALD1-221ENST00000489019 MED17Q9NVC6 651 aa2.55□□□□□ -2
CALD1-221ENST00000489019 TXNL4BQ9NX01 149 aaKnown RBP2.55□□□□□ -2
CALD1-221ENST00000489019 NDUFB11Q9NX14 153 aa2.55□□□□□ -2
CALD1-221ENST00000489019 HAO2Q9NYQ3 351 aa2.55□□□□□ -2
CALD1-221ENST00000489019 GMEB2Q9UKD1 530 aa2.55□□□□□ -2
CALD1-221ENST00000489019 BAIAP2Q9UQB8 552 aa2.55□□□□□ -2
CALD1-221ENST00000489019 ERVK-19Q9WJR5 959 aa2.55□□□□□ -2
CALD1-221ENST00000489019 PAM16Q9Y3D7 125 aa2.55□□□□□ -2
CALD1-221ENST00000489019 RNF215Q9Y6U7 377 aa2.55□□□□□ -2
CALD1-221ENST00000489019 PCNTO95613 3336 aa2.55□□□□□ -2
CALD1-221ENST00000489019 CENPFP49454 3210 aa2.55□□□□□ -2
CALD1-221ENST00000489019 DOCK8Q8NF50 2099 aa2.54□□□□□ -2
CALD1-221ENST00000489019 DOCK9Q9BZ29 2069 aa2.54□□□□□ -2
CALD1-221ENST00000489019 FANCMQ8IYD8 2048 aa2.54□□□□□ -2
CALD1-221ENST00000489019 HTTP42858 3142 aa2.54□□□□□ -2
CALD1-221ENST00000489019 A0A075B6Q4 140 aa2.54□□□□□ -2
CALD1-221ENST00000489019 TRAV27A0A087WT01 109 aa2.54□□□□□ -2
CALD1-221ENST00000489019 SAA2-SAA4A0A096LPE2 208 aa2.54□□□□□ -2
CALD1-221ENST00000489019 A0A0B4J2E0 115 aa2.54□□□□□ -2
CALD1-221ENST00000489019 IGHV5-51A0A0C4DH38 117 aa2.54□□□□□ -2
CALD1-221ENST00000489019 LINC00854A0A1B0GVQ3 168 aa2.54□□□□□ -2
CALD1-221ENST00000489019 A0A1B0GWA3 101 aa2.54□□□□□ -2
CALD1-221ENST00000489019 A0A1B0GX12 115 aa2.54□□□□□ -2
CALD1-221ENST00000489019 A0A1W2PRV1 198 aa2.54□□□□□ -2
CALD1-221ENST00000489019 LNP1A1A4G5 178 aa2.54□□□□□ -2
CALD1-221ENST00000489019 FUOMA2VDF0 154 aa2.54□□□□□ -2
CALD1-221ENST00000489019 SMIM30A4D0T7 59 aa2.54□□□□□ -2
CALD1-221ENST00000489019 ISPDA4D126 451 aa2.54□□□□□ -2
CALD1-221ENST00000489019 FABP12A6NFH5 140 aa2.54□□□□□ -2
CALD1-221ENST00000489019 SERINC4A6NH21 518 aa2.54□□□□□ -2
CALD1-221ENST00000489019 FAM183AA6NL82 134 aa2.54□□□□□ -2
CALD1-221ENST00000489019 SHISA7A6NL88 538 aa2.54□□□□□ -2
CALD1-221ENST00000489019 C12orf71A8MTZ7 269 aa2.54□□□□□ -2
CALD1-221ENST00000489019 PRAC2D3DTV9 90 aa2.54□□□□□ -2
CALD1-221ENST00000489019 H0YIG0 161 aa2.54□□□□□ -2
CALD1-221ENST00000489019 J3QLW9 94 aa2.54□□□□□ -2
CALD1-221ENST00000489019 SOCS6O14544 535 aa2.54□□□□□ -2
CALD1-221ENST00000489019 CDC42EP2O14613 210 aa2.54□□□□□ -2
CALD1-221ENST00000489019 POLR1CO15160 346 aaPredicted RBP2.54□□□□□ -2
CALD1-221ENST00000489019 OGG1O15527 345 aa2.54□□□□□ -2
CALD1-221ENST00000489019 ZNF749O43361 778 aa2.54□□□□□ -2
CALD1-221ENST00000489019 RNF13O43567 381 aa2.54□□□□□ -2
CALD1-221ENST00000489019 HCRTR1O43613 425 aa2.54□□□□□ -2
CALD1-221ENST00000489019 BUB3O43684 328 aa2.54□□□□□ -2
CALD1-221ENST00000489019 CHP2O43745 196 aa2.54□□□□□ -2
CALD1-221ENST00000489019 ZIC3O60481 467 aa2.54□□□□□ -2
CALD1-221ENST00000489019 NDUFS7O75251 213 aa2.54□□□□□ -2
CALD1-221ENST00000489019 REM1O75628 298 aa2.54□□□□□ -2
CALD1-221ENST00000489019 UPK1BO75841 260 aa2.54□□□□□ -2
CALD1-221ENST00000489019 NDUFB2O95178 105 aa2.54□□□□□ -2
CALD1-221ENST00000489019 SNX4O95219 450 aa2.54□□□□□ -2
CALD1-221ENST00000489019 CLDN14O95500 239 aa2.54□□□□□ -2
CALD1-221ENST00000489019 PMS2P2O95744 297 aa2.54□□□□□ -2
CALD1-221ENST00000489019 NUDT14O95848 222 aa2.54□□□□□ -2
CALD1-221ENST00000489019 IGKV1D-16P01601 117 aa2.54□□□□□ -2
CALD1-221ENST00000489019 IGKV3-20P01619 116 aa2.54□□□□□ -2
CALD1-221ENST00000489019 THY1P04216 161 aa2.54□□□□□ -2
CALD1-221ENST00000489019 HLA-DPB1P04440 258 aa2.54□□□□□ -2
CALD1-221ENST00000489019 HIST1H2ABP04908 130 aa2.54□□□□□ -2
CALD1-221ENST00000489019 ADRA2AP08913 450 aa2.54□□□□□ -2
CALD1-221ENST00000489019 MRPL3P09001 348 aaKnown RBP2.54□□□□□ -2
CALD1-221ENST00000489019 HBQ1P09105 142 aa2.54□□□□□ -2
CALD1-221ENST00000489019 IL9P15248 144 aa2.54□□□□□ -2
CALD1-221ENST00000489019 FOSL2P15408 326 aa2.54□□□□□ -2
CALD1-221ENST00000489019 ZNF19P17023 458 aa2.54□□□□□ -2
CALD1-221ENST00000489019 CELP19835 753 aa2.54□□□□□ -2
CALD1-221ENST00000489019 AGAP20933 346 aa2.54□□□□□ -2
CALD1-221ENST00000489019 BCKDHBP21953 392 aa2.54□□□□□ -2
CALD1-221ENST00000489019 RPS4Y1P22090 263 aaKnown RBP2.54□□□□□ -2
CALD1-221ENST00000489019 MYL9P24844 172 aa2.54□□□□□ -2
CALD1-221ENST00000489019 GTF2E2P29084 291 aaKnown RBP2.54□□□□□ -2
CALD1-221ENST00000489019 HTR1FP30939 366 aa2.54□□□□□ -2
CALD1-221ENST00000489019 GABRA5P31644 462 aa2.54□□□□□ -2
CALD1-221ENST00000489019 SDC2P34741 201 aa2.54□□□□□ -2
CALD1-221ENST00000489019 RORAP35398 523 aa2.54□□□□□ -2
CALD1-221ENST00000489019 RBM34P42696 430 aaKnown RBP2.54□□□□□ -2
CALD1-221ENST00000489019 CRYBB2P43320 205 aa2.54□□□□□ -2
CALD1-221ENST00000489019 OR1D4P47884 311 aa2.54□□□□□ -2
CALD1-221ENST00000489019 CXCL12P48061 93 aa2.54□□□□□ -2
CALD1-221ENST00000489019 SLC9A3P48764 834 aa2.54□□□□□ -2
CALD1-221ENST00000489019 ARRB1P49407 418 aaPredicted RBP2.54□□□□□ -2
CALD1-221ENST00000489019 BCAP31P51572 246 aa2.54□□□□□ -2
CALD1-221ENST00000489019 NR0B1P51843 470 aaKnown RBP2.54□□□□□ -2
CALD1-221ENST00000489019 ZNF136P52737 540 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms