RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 OAFQ86UD1 273 aa15.55■□□□□ 0.08
HDAC6-231ENST00000488905 SPICQ8N5J4 248 aa15.55■□□□□ 0.08
HDAC6-231ENST00000488905 DEFB108BQ8NET1 73 aa15.55■□□□□ 0.08
HDAC6-231ENST00000488905 OR13C2Q8NGS9 318 aa15.55■□□□□ 0.08
HDAC6-231ENST00000488905 DVL3Q92997 716 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-231ENST00000488905 POFUT1Q9H488 388 aa15.55■□□□□ 0.08
HDAC6-231ENST00000488905 TMEM106BQ9NUM4 274 aa15.55■□□□□ 0.08
HDAC6-231ENST00000488905 RHCGQ9UBD6 479 aa15.55■□□□□ 0.08
HDAC6-231ENST00000488905 PURGQ9UJV8 347 aaKnown RBP15.55■□□□□ 0.08
HDAC6-231ENST00000488905 PPIAL4AQ9Y536 164 aa15.55■□□□□ 0.08
HDAC6-231ENST00000488905 EFCAB9A8MZ26 197 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 WIPF1O43516 503 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 SCG5P05408 212 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 TNFSF4P23510 183 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 HTR5AP47898 357 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 SLC9A3P48764 834 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 PRKCDQ05655 676 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 SCRN3Q0VDG4 424 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 CDK5R2Q13319 367 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 ARMCX4Q5H9R4 360 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 ZNF283Q8N7M2 679 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 PCYOX1LQ8NBM8 494 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 LZICQ8WZA0 190 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 POP5Q969H6 163 aaKnown RBP15.54■□□□□ 0.08
HDAC6-231ENST00000488905 WACQ9BTA9 647 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 EMC7Q9NPA0 242 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 DDX28Q9NUL7 540 aaKnown RBP15.54■□□□□ 0.08
HDAC6-231ENST00000488905 TBCCD1Q9NVR7 557 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 GID8Q9NWU2 228 aa15.54■□□□□ 0.08
HDAC6-231ENST00000488905 ELOVL7A1L3X0 281 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 J3KTA2 159 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 IFNW1P05000 195 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 SBK2P0C263 348 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 TROVE2P10155 538 aaKnown RBP eCLIP15.53■□□□□ 0.08
HDAC6-231ENST00000488905 TNFRSF1AP19438 455 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 KITLGP21583 273 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 RBMXP38159 391 aaKnown RBP15.53■□□□□ 0.08
HDAC6-231ENST00000488905 YAP1P46937 504 aaKnown RBP15.53■□□□□ 0.08
HDAC6-231ENST00000488905 BTG1P62324 171 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 TRAM2Q15035 370 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 TMEM155Q4W5P6 130 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 HDXQ7Z353 690 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 VTCN1Q7Z7D3 282 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 KLHL36Q8N4N3 616 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 FAM156AQ8NDB6 213 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 OR2Z1Q8NG97 314 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 SAMD8Q96LT4 415 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 DCLRE1CQ96SD1 692 aaKnown RBP15.53■□□□□ 0.08
HDAC6-231ENST00000488905 FNDC11Q9BVV2 318 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 VIPAS39Q9H9C1 493 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 PATZ1Q9HBE1 687 aaKnown RBP15.53■□□□□ 0.08
HDAC6-231ENST00000488905 SAR1AQ9NR31 198 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 MMP26Q9NRE1 261 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 POLR3KQ9Y2Y1 108 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-231ENST00000488905 ADAM18Q9Y3Q7 739 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 SNX13Q9Y5W8 968 aa15.53■□□□□ 0.08
HDAC6-231ENST00000488905 FFAR1O14842 300 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 SGCEO43556 437 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 TUBG1P23258 451 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 GPR4P46093 362 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 SEC61A1P61619 476 aaKnown RBP15.52■□□□□ 0.08
HDAC6-231ENST00000488905 TUSC1Q2TAM9 212 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 MESTQ5EB52 335 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 RBMS3Q6XE24 437 aaKnown RBP15.52■□□□□ 0.08
HDAC6-231ENST00000488905 Q6ZR03 302 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 VASH1Q7L8A9 365 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-231ENST00000488905 SIGLECL1Q8N7X8 197 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 ACOT11Q8WXI4 607 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-231ENST00000488905 ZNF570Q96NI8 536 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 SIGLEC11Q96RL6 698 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 TUBG2Q9NRH3 451 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 EGFL7Q9UHF1 273 aa15.52■□□□□ 0.08
HDAC6-231ENST00000488905 A0A087WUU8 490 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 LOC100653049A0A140TA62 436 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 A8MXK9 166 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 F5H0A9 414 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-231ENST00000488905 XKRYO14609 159 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 CDC42EP2O14613 210 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 KRT34O76011 436 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 ZNF12P17014 697 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 RPL4P36578 427 aaKnown RBP15.51■□□□□ 0.07
HDAC6-231ENST00000488905 ZNF154Q13106 437 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 AQP6Q13520 282 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 ZMYND11Q15326 602 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 ZNF730Q6ZMV8 503 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 DOK3Q7L591 496 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 RNF113BQ8IZP6 322 aaKnown RBP15.51■□□□□ 0.07
HDAC6-231ENST00000488905 ITLN1Q8WWA0 313 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 Q96M85 177 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 GRHPRQ9UBQ7 328 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 IL19Q9UHD0 177 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 NUP50Q9UKX7 468 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 PPP1R3CQ9UQK1 317 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 AUP1Q9Y679 476 aa15.51■□□□□ 0.07
HDAC6-231ENST00000488905 TEX13CA0A0J9YWL9 993 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 PRSS37A4D1T9 235 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 DNAJC9-AS1A6NH13 148 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 TRAPPC2LH3BP13 241 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 AHCYL1O43865 530 aa15.5■□□□□ 0.07
HDAC6-231ENST00000488905 CD14P08571 375 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms