RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 EID2Q8N6I1 236 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 OR1L6Q8NGR2 347 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 RHEBL1Q8TAI7 183 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 PTX4Q96A99 478 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 C12orf42Q96LP6 360 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 COL21A1Q96P44 957 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 GON7Q9BXV9 100 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 FGF23Q9GZV9 251 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-212ENST00000488896 SGK2Q9HBY8 427 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 ZNF639Q9UID6 485 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 CBY1Q9Y3M2 126 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 SCN1AP35498 2009 aa1.91□□□□□ -2.1
PTPN4-212ENST00000488896 AHDC1Q5TGY3 1603 aaPredicted RBP1.91□□□□□ -2.1
PTPN4-212ENST00000488896 CNTNAP1P78357 1384 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 TMEM120BA0PK00 339 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 BTBD17A6NE02 478 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 BTNL10A8MVZ5 291 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 H6PDO95479 791 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 TSPAN12O95859 305 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 IL1BP01584 269 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 OR5H8P0DN80 308 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 ME2P23368 584 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 GBX2P52951 348 aaPredicted RBP1.9□□□□□ -2.11
PTPN4-212ENST00000488896 AIF1P55008 147 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 TAS2R31P59538 309 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 SEC61GP60059 68 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 MXD1Q05195 221 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 MPV17L2Q567V2 206 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 CASP12Q6UXS9 341 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 SLC25A48Q6ZT89 311 aaKnown RBP1.9□□□□□ -2.11
PTPN4-212ENST00000488896 ZNF664Q8N3J9 261 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 ZFP41Q8N8Y5 198 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 APCDD1LQ8NCL9 501 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 ZNF680Q8NEM1 530 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 TRPV1Q8NER1 839 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 SDR9C7Q8NEX9 313 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 OR4F6Q8NGB9 312 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 UBE2Q2Q8WVN8 375 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 MRGPRFQ96AM1 343 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 PEX16Q9Y5Y5 336 aa1.9□□□□□ -2.11
PTPN4-212ENST00000488896 MYO16Q9Y6X6 1858 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 A0A1B0GW55 424 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 A0A1W2PPV9 198 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 OR6C74A6NCV1 312 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 L7N2F9 121 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 FOXE1O00358 373 aaPredicted RBP1.89□□□□□ -2.11
PTPN4-212ENST00000488896 CHST10O43529 356 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 DUX4L2P0CJ85 424 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 DUX4L3P0CJ86 424 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 DUX4L5P0CJ88 424 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 DUX4L6P0CJ89 424 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 DUX4L7P0CJ90 424 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 CDKN2DP55273 166 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 GPX6P59796 221 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 YWHAGP61981 247 aaKnown RBP eCLIP1.89□□□□□ -2.11
PTPN4-212ENST00000488896 CRADDP78560 199 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 ANKDD1AQ495B1 522 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 PPP1R42Q7Z4L9 355 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 OR8J1Q8NGP2 316 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 CRACR2AQ9BSW2 395 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 CWH43Q9H720 699 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 DUX4Q9UBX2 424 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 ING4Q9UNL4 249 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 CAMTA1Q9Y6Y1 1673 aa1.89□□□□□ -2.11
PTPN4-212ENST00000488896 SEC16AO15027 2179 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 TRAV19A0A0A6YYK7 116 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 REM1O75628 298 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 CD3GP09693 182 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 ATP1B2P14415 290 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-212ENST00000488896 ETS2P15036 469 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 WARSP23381 471 aaKnown RBP1.88□□□□□ -2.11
PTPN4-212ENST00000488896 ACTR1AP61163 376 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 PDIK1LQ8N165 341 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 ZCCHC7Q8N3Z6 543 aaKnown RBP1.88□□□□□ -2.11
PTPN4-212ENST00000488896 LIX1Q8N485 282 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 TTLQ8NG68 377 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 HSD17B10Q99714 261 aaKnown RBP1.88□□□□□ -2.11
PTPN4-212ENST00000488896 ROPN1BQ9BZX4 212 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-212ENST00000488896 EDA2RQ9HAV5 297 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 SIGLEC7Q9Y286 467 aa1.88□□□□□ -2.11
PTPN4-212ENST00000488896 A0A1W2PPE3 182 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 FAM47DPA6NHR8 397 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 SURF6O75683 361 aaKnown RBP1.87□□□□□ -2.11
PTPN4-212ENST00000488896 CLIC3O95833 236 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 IGLV3-25P01717 112 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 IGLV6-57P01721 117 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 F2RP25116 425 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 RND2P52198 227 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 CDK5Q00535 292 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 GK3PQ14409 553 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 IMMTQ16891 758 aaKnown RBP1.87□□□□□ -2.11
PTPN4-212ENST00000488896 RNASE13Q5GAN3 156 aaKnown RBP1.87□□□□□ -2.11
PTPN4-212ENST00000488896 ANKRD26P1Q6NSI1 321 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 CASC1Q6TDU7 716 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 CCDC73Q6ZRK6 1079 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 H2BFWTQ7Z2G1 175 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 EFL1Q7Z2Z2 1120 aaKnown RBP1.87□□□□□ -2.11
PTPN4-212ENST00000488896 RHOXF2Q9BQY4 288 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 C8orf17Q9NRJ1 99 aa1.87□□□□□ -2.11
PTPN4-212ENST00000488896 TRAV6A0A075B6T7 132 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms