RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 ACTBP60709 375 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 STXBP1P61764 594 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 RPS13P62277 151 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 HIST1H2BCP62807 126 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ACTG1P63261 375 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 GLO1Q04760 184 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ST3GAL3Q11203 375 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 USF2Q15853 346 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 HIST2H2BEQ16778 126 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ACTBL2Q562R1 376 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 BEX5Q5H9J7 111 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 TMEM31Q5JXX7 168 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 C9orf64Q5T6V5 341 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ARHGAP40Q5TG30 622 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 NUP210LQ5VU65 1888 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SDHAF4Q5VUM1 108 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 MBNL2Q5VZF2 373 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 FAHD2BQ6P2I3 314 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 TNFAIP8L2Q6P589 184 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ANKRD16Q6P6B7 361 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 FAM151BQ6UXP7 276 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SERPINA13PQ6UXR4 307 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 MBOAT2Q6ZWT7 520 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 THOC6Q86W42 341 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 VRK2Q86Y07 508 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 LRRC18Q8N456 261 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ACBD4Q8NC06 268 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR4E2Q8NGC2 313 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR13C8Q8NGS7 320 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR4K15Q8NH41 348 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SUN3Q8TAQ9 357 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 DTD1Q8TEA8 209 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 MITD1Q8WV92 249 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ING5Q8WYH8 240 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 HIST1H2BHQ93079 126 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 MUCL1Q96DR8 90 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 PELI1Q96FA3 418 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 FAHD2AQ96GK7 314 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 DOCK6Q96HP0 2047 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 AKR1E2Q96JD6 320 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 OR14A2Q96R54 314 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 HIST1H2BNQ99877 126 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 HIST1H2BMQ99879 126 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 TMEM208Q9BTX3 173 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SUCNR1Q9BXA5 334 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 NMES1Q9C002 83 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SELENOIQ9C0D9 397 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SLITRK2Q9H156 845 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 HRH4Q9H3N8 390 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 EPHX3Q9H6B9 360 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 ASB8Q9H765 288 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 DMRT3Q9NQL9 472 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SPHK2Q9NRA0 654 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 CMC2Q9NRP2 79 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SIRT3Q9NTG7 399 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SLC2A8Q9NY64 477 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 TAAR2Q9P1P5 351 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 SCML2Q9UQR0 700 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 V9GY05 133 aa4.28□□□□□ -1.72
CDC42BPA-213ENST00000488131 A0A087WWC5 75 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 A0A1B0GW64 132 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 A0A1W2PPE2 198 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 TMEM210A6NLX4 147 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 TRDCB7Z8K6 153 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 J3QLW9 94 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 M0QZ92 97 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 ZNF197O14709 1029 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 TGOLN2O43493 480 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 SYT7O43581 403 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 GMFGO60234 142 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 B4GALT2O60909 372 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 DNAJB6O75190 326 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 ZNF821O75541 412 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 PRAMEF12O95522 483 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 AIFM1O95831 613 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 PLA2G1BP04054 148 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 PTHLHP12272 177 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 GTF2F2P13984 249 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 IL9P15248 144 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 ZNF19P17023 458 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 GABRR1P24046 479 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 LMO1P25800 156 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 PSMB6P28072 239 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 PPP2R1BP30154 601 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 IL2RGP31785 369 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 PYCR1P32322 319 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 MAP3K8P41279 467 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 CX3CR1P49238 355 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 GNG10P50151 68 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 ZNF84P51523 738 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 HMGCS2P54868 508 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 MC1RQ01726 317 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 MEF2AQ02078 507 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 GGTLC2Q14390 218 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 CLINT1Q14677 625 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 SLC10A1Q14973 349 aa4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 ATXN7L3Q14CW9 347 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-213ENST00000488131 RAB35Q15286 201 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms