RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 GAAP10253 952 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 DBTP11182 482 aaKnown RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 B4GALT1P15291 398 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 COX5AP20674 150 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 MSR1P21757 451 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 MPGP29372 298 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 CHRNB4P30926 498 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 ATP6V1E1P36543 226 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 NAA10P41227 235 aaPredicted RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 MTNR1AP48039 350 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 ZNF133P52736 654 aaPredicted RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 EFNB1P98172 346 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 DBPQ10586 325 aaPredicted RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 FAPQ12884 760 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 TMED1Q13445 227 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 GGTLC2Q14390 218 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 SMN1Q16637 294 aaKnown RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 SLC25A35Q3KQZ1 300 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 PHYHD1Q5SRE7 291 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 C9orf135Q5VTT2 229 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 SLC25A47Q6Q0C1 308 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 ZNF813Q6ZN06 617 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 Q6ZT83 130 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 LINGO2Q7L985 606 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 ZBTB46Q86UZ6 589 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 ERI1Q8IV48 349 aaKnown RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 OR6V1Q8N148 313 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 BPIFB6Q8NFQ5 453 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 SLC26A10Q8NG04 563 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 ASB5Q8WWX0 329 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 KISS1RQ969F8 398 aaPredicted RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 STARD4Q96DR4 205 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 ZMYND19Q96E35 227 aaPredicted RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 RNFT2Q96EX2 444 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 FOXN4Q96NZ1 517 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 INTS14Q96SY0 518 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 DDOQ99489 341 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 FOXB1Q99853 325 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 RBM24Q9BX46 236 aaKnown RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 CDIP1Q9H305 208 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 SEC61A2Q9H9S3 476 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 TMEM38BQ9NVV0 291 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 SCN3BQ9NY72 215 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 TAS2R16Q9NYV7 291 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 COQ3Q9NZJ6 369 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 ZNF629Q9UEG4 869 aaPredicted RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 B9D1Q9UPM9 204 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 RPL36Q9Y3U8 105 aaKnown RBP6.72□□□□□ -1.33
GARNL3-218ENST00000487565 UGT2A1Q9Y4X1 527 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 COMMD3-BMI1R4GMX3 469 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 POLEQ07864 2286 aa6.72□□□□□ -1.33
GARNL3-218ENST00000487565 TVP23AA6NH52 213 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 ZNF99A8MXY4 864 aaPredicted RBP6.71□□□□□ -1.34
GARNL3-218ENST00000487565 RPL36A-HNRNPH2H7BZ11 118 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 XPNPEP2O43895 674 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 SELENOFO60613 162 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 APOL3O95236 402 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 FARS2O95363 451 aaKnown RBP6.71□□□□□ -1.34
GARNL3-218ENST00000487565 TNFAIP8O95379 198 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 CGAP01215 116 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 HRGP04196 525 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 SPARCP09486 303 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 CCDC159P0C7I6 412 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 PIPP12273 146 aaPredicted RBP6.71□□□□□ -1.34
GARNL3-218ENST00000487565 NPR2P20594 1047 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 IL32P24001 234 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 LAP3P28838 519 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 CDAP32320 146 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 ENTPD1P49961 510 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 ASCL1P50553 236 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 CHN2P52757 468 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 CXCR4P61073 352 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 CSNK2BP67870 215 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 ACTC1P68032 377 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 ACTA1P68133 377 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 ADAM8P78325 824 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 MRPS34P82930 218 aaKnown RBP6.71□□□□□ -1.34
GARNL3-218ENST00000487565 ARF1P84077 181 aaKnown RBP6.71□□□□□ -1.34
GARNL3-218ENST00000487565 TGFBR3Q03167 851 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 RAB40BQ12829 278 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 P2RY6Q15077 328 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 ETFDHQ16134 617 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 SGCAQ16586 387 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 RBM48Q5RL73 367 aaKnown RBP6.71□□□□□ -1.34
GARNL3-218ENST00000487565 C6orf141Q5SZD1 244 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 LINC01590Q5TEZ4 76 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 KLHL24Q6TFL4 600 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 TEPPQ6URK8 271 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 FOXL2NBQ6ZUU3 175 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 AHSA2Q719I0 299 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 SHFQ7M4L6 423 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 MRGPRGQ86SM5 289 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 LUZP2Q86TE4 346 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 SLC35F2Q8IXU6 374 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 RELL2Q8NC24 303 aaPredicted RBP6.71□□□□□ -1.34
GARNL3-218ENST00000487565 C1orf162Q8NEQ5 155 aaPredicted RBP6.71□□□□□ -1.34
GARNL3-218ENST00000487565 OR10H4Q8NGA5 316 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 OR51G2Q8NGK0 314 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 OR6N2Q8NGY6 317 aa6.71□□□□□ -1.34
GARNL3-218ENST00000487565 PTP4A1Q93096 173 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms