RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 EVX1P49640 407 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 RGS6P49758 472 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 RAD23AP54725 363 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 ADAM8P78325 824 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 PPP2R2BQ00005 443 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 HGFACQ04756 655 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 KRT80Q6KB66 452 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 VHLLQ6RSH7 139 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 PRSS57Q6UWY2 283 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 IQCF1Q8N6M8 205 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 OR6K6Q8NGW6 343 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 DCLRE1CQ96SD1 692 aaKnown RBP12.66□□□□□ -0.38
LIMS3-205ENST00000487150 DDOQ99489 341 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 PKP2Q99959 881 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 C9orf16Q9BUW7 83 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 WNT5BQ9H1J7 359 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 ITGB1BP2Q9UKP3 347 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 SAC3D1A6NKF1 404 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 OVOL3O00110 214 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 ICMTO60725 284 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 CCNOP22674 350 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 PTH2RP49190 550 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 ADIPOQQ15848 244 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 SNAPC1Q16533 368 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 MOGQ16653 247 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 SLC35D3Q5M8T2 416 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 ZNF362Q5T0B9 420 aaPredicted RBP12.65□□□□□ -0.38
LIMS3-205ENST00000487150 LCN1P1Q5VSP4 162 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 RGS7BPQ6MZT1 257 aaPredicted RBP12.65□□□□□ -0.38
LIMS3-205ENST00000487150 UGT2A3Q6UWM9 527 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 SPNS3Q6ZMD2 512 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 VASH1Q7L8A9 365 aaPredicted RBP12.65□□□□□ -0.38
LIMS3-205ENST00000487150 OR9Q1Q8NGQ5 310 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 AKR7LQ8NHP1 331 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 OTULINQ96BN8 352 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 POM121L2Q96KW2 1035 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 COQ7Q99807 217 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 CIB1Q99828 191 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 GABARAPL3Q9BY60 117 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 PLK3Q9H4B4 646 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 C8orf4Q9NR00 106 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 USE1Q9NZ43 259 aa12.65□□□□□ -0.38
LIMS3-205ENST00000487150 ZAR1LA6NP61 321 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 GLCEO94923 617 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 ABHD16AO95870 558 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 MT-ND5P03915 603 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 THBS4P35443 961 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 ENTPD1P49961 510 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 PPOXP50336 477 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 ALDH3A2P51648 485 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 UCP2P55851 309 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 ATP5J2P56134 94 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 PTGES3Q15185 160 aaKnown RBP12.64□□□□□ -0.39
LIMS3-205ENST00000487150 TEX30Q5JUR7 227 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 ELFN2Q5R3F8 820 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 C11orf71Q6IPW1 123 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 ZNF774Q6NX45 483 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.64□□□□□ -0.39
LIMS3-205ENST00000487150 CPEB3Q8NE35 698 aaKnown RBP12.64□□□□□ -0.39
LIMS3-205ENST00000487150 OR1F12Q8NHA8 337 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 MRPL24Q96A35 216 aaKnown RBP12.64□□□□□ -0.39
LIMS3-205ENST00000487150 PERPQ96FX8 193 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 FOXN4Q96NZ1 517 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 CACNG6Q9BXT2 260 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 DYNLRB1Q9NP97 96 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 SLCO1C1Q9NYB5 712 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 CYB5R1Q9UHQ9 305 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 LHFPL6Q9Y693 200 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 COMMD3-BMI1R4GMX3 469 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 CSMD2Q7Z408 3487 aa12.64□□□□□ -0.39
LIMS3-205ENST00000487150 ANKRD17O75179 2603 aaKnown RBP12.63□□□□□ -0.39
LIMS3-205ENST00000487150 POLQO75417 2590 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 MPZL1O95297 269 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 TFP02787 698 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 ALPLP05186 524 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 GSTT1P30711 240 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 PYCR1P32322 319 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 HIST1H3AP68431 136 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 HIST2H3PS2Q5TEC6 136 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 SLX4IPQ5VYV7 408 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 SLC18B1Q6NT16 456 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 ACSM5Q6NUN0 579 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 PLBD1Q6P4A8 553 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 HIST2H3AQ71DI3 136 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 CXXC5Q7LFL8 322 aaKnown RBP12.63□□□□□ -0.39
LIMS3-205ENST00000487150 SHFQ7M4L6 423 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 SPTSSAQ969W0 71 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 EME1Q96AY2 570 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 C4orf45Q96LM5 186 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 INTS14Q96SY0 518 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 PITX2Q99697 317 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 ATF6BQ99941 703 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 TBCCD1Q9NVR7 557 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 TVP23BQ9NYZ1 205 aa12.63□□□□□ -0.39
LIMS3-205ENST00000487150 CGGBP1Q9UFW8 167 aaPredicted RBP12.63□□□□□ -0.39
LIMS3-205ENST00000487150 GDF2Q9UK05 429 aaPredicted RBP12.63□□□□□ -0.39
LIMS3-205ENST00000487150 CCDC168Q8NDH2 2452 aa12.62□□□□□ -0.39
LIMS3-205ENST00000487150 A0A1W2PPW3 197 aa12.62□□□□□ -0.39
LIMS3-205ENST00000487150 FAM171A2A8MVW0 826 aa12.62□□□□□ -0.39
LIMS3-205ENST00000487150 M0R233 179 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms