RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CALHM2Q9HA72 323 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 PLEKHJ1Q9NW61 149 aa11.93□□□□□ -0.5
HMGN1-216ENST00000486741 DCTN6O00399 190 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 MTRF1O75570 445 aaKnown RBP11.92□□□□□ -0.5
HMGN1-216ENST00000486741 FAPQ12884 760 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 TNK1Q13470 666 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 MESTQ5EB52 335 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 FHL5Q5TD97 284 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 MAMSTRQ6ZN01 415 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF615Q8N8J6 731 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 BOLLQ8N9W6 283 aaKnown RBP11.92□□□□□ -0.5
HMGN1-216ENST00000486741 CLEC1AQ8NC01 280 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 OR5H2Q8NGV7 314 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 ST8SIA1Q92185 356 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 SPACA9Q96E40 222 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-216ENST00000486741 BORCS8Q96FH0 119 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF845Q96IR2 970 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-216ENST00000486741 SORCS2Q96PQ0 1159 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 C20orf85Q9H1P6 137 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 MYOTQ9UBF9 498 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF223Q9UK11 482 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-216ENST00000486741 NAP1L6A6NFF2 107 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 OR6C76A6NM76 312 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 AKR7A2O43488 359 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 PTP4A3O75365 173 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 DBHP09172 617 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 FCGR2AP12318 317 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 HLA-DOBP13765 273 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 PRSS12P56730 875 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 RHBDD2Q6NTF9 364 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 SLC16A14Q7RTX9 510 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 GRAMD2AQ8IUY3 354 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 OR2M2Q96R28 347 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 MNTQ99583 582 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 A0A0A6YYJ9 748 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 GGT3PA6NGU5 568 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 HSPA12AO43301 675 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 ADAM11O75078 769 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 TP53P04637 393 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-216ENST00000486741 CSF2RBP32927 897 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 CCR9P51686 369 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 ARG2P78540 354 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 PXDC1Q5TGL8 231 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 OR52N5Q8NH56 324 aa11.92□□□□□ -0.5
HMGN1-216ENST00000486741 CCNL2Q96S94 520 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-216ENST00000486741 RBMXP38159 391 aaKnown RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 EIF1P41567 113 aaKnown RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 CYB561P49447 251 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 MRPS10P82664 201 aaKnown RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 STEAP1BQ6NZ63 245 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 ACKR4Q9NPB9 350 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 MRM2Q9UI43 246 aaKnown RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 HIF3AQ9Y2N7 669 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 LRP12Q9Y561 859 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 LOC100289279A0A1B0GTE1 492 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 MASP2O00187 686 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 RP2O75695 350 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 MSX1P28360 303 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 LAP3P28838 519 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 CLDN6P56747 220 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 PMPCAQ10713 525 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 MFAP5Q13361 173 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 STK11Q15831 433 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 SLC25A30Q5SVS4 291 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 C11orf40Q8WZ69 217 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 CTHRC1Q96CG8 243 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 MRPS28Q9Y2Q9 187 aaKnown RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 TCRBV16S1A1N1A0A5B0 115 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 H7C2Y5 167 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 CXCL13O43927 109 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 MRPL33O75394 65 aaKnown RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 APOC3P02656 99 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 CEBPGP53567 150 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 IL13RA1P78552 427 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 GRK1Q15835 563 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 FAM189A2Q15884 450 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 DMKNQ6E0U4 476 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 PHYHIPQ92561 330 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 UBQLN2Q9UHD9 624 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 LOXL2Q9Y4K0 774 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 FRMPD3Q5JV73 1810 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 SC5DO75845 299 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 HLA-AP01891 365 aaKnown RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 HRGP04196 525 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 GUSBP08236 651 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF16P17020 682 aaPredicted RBP11.91□□□□□ -0.5
HMGN1-216ENST00000486741 MTCP1P56278 107 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 SWI5Q1ZZU3 235 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 OR51A4Q8NGJ6 313 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 ZNF721Q8TF20 911 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 FBXL2Q9UKC9 423 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 B3GALT5Q9Y2C3 310 aa11.91□□□□□ -0.5
HMGN1-216ENST00000486741 IFNA21P01568 189 aa11.9□□□□□ -0.5
HMGN1-216ENST00000486741 TAS2R19P59542 299 aa11.9□□□□□ -0.5
HMGN1-216ENST00000486741 GLIPR1L1Q6UWM5 242 aa11.9□□□□□ -0.5
HMGN1-216ENST00000486741 ADGRG3Q86Y34 549 aa11.9□□□□□ -0.5
HMGN1-216ENST00000486741 ROBO4Q8WZ75 1007 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms