RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 NTN4Q9HB63 628 aa15.66■□□□□ 0.1
COL1A1-207ENST00000486572 DYNLRB1Q9NP97 96 aa15.66■□□□□ 0.1
COL1A1-207ENST00000486572 EIF3KQ9UBQ5 218 aaKnown RBP15.66■□□□□ 0.1
COL1A1-207ENST00000486572 REV1Q9UBZ9 1251 aa15.66■□□□□ 0.1
COL1A1-207ENST00000486572 KLHL21Q9UJP4 597 aa15.66■□□□□ 0.1
COL1A1-207ENST00000486572 ACANP16112 2415 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 ARFGEF3Q5TH69 2177 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 F12P00748 615 aaPredicted RBP15.65■□□□□ 0.1
COL1A1-207ENST00000486572 PRKACGP22612 351 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 WNT5AP41221 380 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 HTR5AP47898 357 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 ATP6AP1Q15904 470 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 MEP1BQ16820 701 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 ZNF362Q5T0B9 420 aaPredicted RBP15.65■□□□□ 0.1
COL1A1-207ENST00000486572 UNQ6126/PRO20091Q6UXV3 157 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 VASH1Q7L8A9 365 aaPredicted RBP15.65■□□□□ 0.1
COL1A1-207ENST00000486572 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.65■□□□□ 0.1
COL1A1-207ENST00000486572 ATG16L2Q8NAA4 619 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 SLC37A3Q8NCC5 494 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 ICA1LQ8NDH6 482 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 OR10H5Q8NGA6 315 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 OR2T4Q8NH00 348 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 NRBF2Q96F24 287 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 DUS3LQ96G46 650 aaKnown RBP15.65■□□□□ 0.1
COL1A1-207ENST00000486572 COX4I2Q96KJ9 171 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 DDOQ99489 341 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 PLEK2Q9NYT0 353 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 FZR1Q9UM11 496 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 AP4S1Q9Y587 144 aa15.65■□□□□ 0.1
COL1A1-207ENST00000486572 RIIAD1A6NNX1 92 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 FAM171A2A8MVW0 826 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 M0R233 179 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 SYNGR3O43761 229 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 ICMTO60725 284 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 IFNGP01579 166 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 HLA-DQA2P01906 255 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 TFP02787 698 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 ERCC1P07992 297 aaPredicted RBP15.64■□□□□ 0.09
COL1A1-207ENST00000486572 INHBBP09529 407 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 GRK5P34947 590 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 ERVS71-1P61550 626 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 TEKQ02763 1124 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 TNK1Q13470 666 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 CRMP1Q14194 572 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 CLEC2AQ6UVW9 174 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 LRP11Q86VZ4 500 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 ZNF101Q8IZC7 436 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 CIARTQ8N365 385 aaPredicted RBP15.64■□□□□ 0.09
COL1A1-207ENST00000486572 PROKR2Q8NFJ6 384 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 OR1J1Q8NGS3 322 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 DNAJC9Q8WXX5 260 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 RBM4Q9BWF3 364 aaKnown RBP15.64■□□□□ 0.09
COL1A1-207ENST00000486572 RAB1BQ9H0U4 201 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 KIF17Q9P2E2 1029 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 ATPIF1Q9UII2 106 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 DUSP13Q9UII6 198 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 LHFPL6Q9Y693 200 aa15.64■□□□□ 0.09
COL1A1-207ENST00000486572 A0A1W2PPW3 197 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 RER1O15258 196 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 LY6HO94772 140 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 FCGR1AP12314 374 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 OSMP13725 252 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 ZNF250P15622 560 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 ZNF3P17036 446 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 FASP25445 335 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 POU1F1P28069 291 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 PYCR1P32322 319 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 KLF3P57682 345 aaPredicted RBP15.63■□□□□ 0.09
COL1A1-207ENST00000486572 DSCR9P59020 149 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 SELENOVP59797 346 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 SLC27A4Q6P1M0 643 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 ARL9Q6T311 187 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 RFPL4BQ6ZWI9 263 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 IQCF1Q8N6M8 205 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 ZNF525Q8N782 197 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 GJC3Q8NFK1 279 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 OR9Q1Q8NGQ5 310 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 OR5K1Q8NHB7 308 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 SYNPRQ8TBG9 265 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 CMC2Q9NRP2 79 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 MYEF2Q9P2K5 600 aaKnown RBP15.63■□□□□ 0.09
COL1A1-207ENST00000486572 VPS13CQ709C8 3753 aa15.63■□□□□ 0.09
COL1A1-207ENST00000486572 IGLV3-9A0A075B6K5 115 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 OR6C6A6NF89 314 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 ADRA2AP08913 450 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 CSF3P09919 207 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 SLC25A1P53007 311 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 HIST1H3AP68431 136 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 CCDC92Q53HC0 331 aaPredicted RBP15.62■□□□□ 0.09
COL1A1-207ENST00000486572 HIST2H3PS2Q5TEC6 136 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 FAHD1Q6P587 224 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 HIST2H3AQ71DI3 136 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 BIVMQ86UB2 503 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 C1orf174Q8IYL3 243 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 OR1F12Q8NHA8 337 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 ABHD4Q8TB40 342 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 C4orf45Q96LM5 186 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 RHNO1Q9BSD3 238 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 NMNAT2Q9BZQ4 307 aa15.62■□□□□ 0.09
COL1A1-207ENST00000486572 HDHD2Q9H0R4 259 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms