RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 LY6HO94772 140 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 CLPTM1O96005 669 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 SCG5P05408 212 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 TCN1P20061 433 aaPredicted RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 ACHEP22303 614 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 COL8A2P25067 703 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 MSX2P35548 267 aaPredicted RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 CDKN2AP42771 156 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 CRYBB2P43320 205 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 GPR4P46093 362 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 GDI2P50395 445 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 MMP15P51511 669 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 KLF3P57682 345 aaPredicted RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 HIST1H3AP68431 136 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 HSF2Q03933 536 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 TRAP1Q12931 704 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 TSPAN31Q12999 210 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 AQP6Q13520 282 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 MESTQ5EB52 335 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 FGD3Q5JSP0 725 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 ELFN2Q5R3F8 820 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 C6orf52Q5T4I8 152 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 HIST2H3PS2Q5TEC6 136 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 LCN8Q6JVE9 175 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 RPL13AP3Q6NVV1 102 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 CD300LDQ6UXZ3 194 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 HIST2H3AQ71DI3 136 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 ZBTB46Q86UZ6 589 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 IGFN1Q86VF2 1251 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 PRIMA1Q86XR5 153 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 ZDHHC21Q8IVQ6 265 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 ZCCHC24Q8N2G6 241 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 PAQR4Q8N4S7 273 aaPredicted RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 CCDC197Q8NCU1 140 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 OR52J3Q8NH60 311 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 GNPDA2Q8TDQ7 276 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 NSMAFQ92636 917 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 FAM46AQ96IP4 442 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 RSRC1Q96IZ7 334 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 C4orf45Q96LM5 186 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 ZNF570Q96NI8 536 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 DCLRE1CQ96SD1 692 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 DIRC2Q96SL1 478 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 DDOQ99489 341 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 RACGAP1Q9H0H5 632 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 CHODLQ9H9P2 273 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 DYNLRB1Q9NP97 96 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 HINT3Q9NQE9 182 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 YAE1D1Q9NRH1 226 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 CYSLTR2Q9NS75 346 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 TAS2R1Q9NYW7 299 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 IL20Q9NYY1 176 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 TAAR3PQ9P1P4 343 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 LPAR3Q9UBY5 353 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 DUSP13Q9UII6 198 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 CDC42EP3Q9UKI2 254 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 NDRG4Q9ULP0 352 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 TMCC3Q9ULS5 477 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 PRPF19Q9UMS4 504 aaKnown RBP5.99□□□□□ -1.45
VPS50-218ENST00000485994 ADAM18Q9Y3Q7 739 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 IER3IP1Q9Y5U9 82 aa5.99□□□□□ -1.45
VPS50-218ENST00000485994 IGHV4-61A0A0C4DH41 118 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 TCRBV5S2A0A599 114 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 C5orf49A4QMS7 147 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 SGCEO43556 437 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 LMX1BO60663 402 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 SLC16A7O60669 478 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 DIRAS1O95057 198 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 IFNA2P01563 188 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 HPXP02790 462 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 MT-ND5P03915 603 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 LCKP06239 509 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 CCL2P13500 99 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 CTLA4P16410 223 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 RRM2P31350 389 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 SLC6A6P31641 620 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 WNT5AP41221 380 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 RGS6P49758 472 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 ARHGDIAP52565 204 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 CHN2P52757 468 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 MS4A2Q01362 244 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 TEKQ02763 1124 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 SCRN3Q0VDG4 424 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 COX10Q12887 443 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 TOP3AQ13472 1001 aaPredicted RBP5.98□□□□□ -1.45
VPS50-218ENST00000485994 KRR1Q13601 381 aaKnown RBP5.98□□□□□ -1.45
VPS50-218ENST00000485994 ZNF362Q5T0B9 420 aaPredicted RBP5.98□□□□□ -1.45
VPS50-218ENST00000485994 ZNF770Q6IQ21 691 aaPredicted RBP5.98□□□□□ -1.45
VPS50-218ENST00000485994 ZNF774Q6NX45 483 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 TMEM154Q6P9G4 183 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 DNM1P34Q6PK57 102 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 RASSF6Q6ZTQ3 369 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 PTCHD4Q6ZW05 846 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 DHFR2Q86XF0 187 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 GLB1L2Q8IW92 636 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 ZNF101Q8IZC7 436 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 CLDN22Q8N7P3 220 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 GJC3Q8NFK1 279 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 OR1J1Q8NGS3 322 aa5.98□□□□□ -1.45
VPS50-218ENST00000485994 KLF14Q8TD94 323 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms