RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NDRG4Q9ULP0 352 aaKnown RBP16.25■□□□□ 0.19
COL27A1-205ENST00000485397 TENM1Q9UKZ4 2725 aa16.25■□□□□ 0.19
COL27A1-205ENST00000485397 IGHV2-70P01814 119 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 TROVE2P10155 538 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL27A1-205ENST00000485397 ZMAT1Q5H9K5 638 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 OTPQ5XKR4 325 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 TBPL2Q6SJ96 375 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 ARL9Q6T311 187 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 Q6ZR03 302 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 SYT9Q86SS6 491 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 TREML1Q86YW5 311 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 TMEM106BQ9NUM4 274 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 FGFR1OP2Q9NVK5 253 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 EGFL7Q9UHF1 273 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 PURGQ9UJV8 347 aaKnown RBP16.24■□□□□ 0.19
COL27A1-205ENST00000485397 ADAM18Q9Y3Q7 739 aa16.24■□□□□ 0.19
COL27A1-205ENST00000485397 A0A087WUU8 490 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 CDC42EP2O14613 210 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 FOXH1O75593 365 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 IFNW1P05000 195 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 GPR4P46093 362 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 HTR5AP47898 357 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 ANKDD1AQ495B1 522 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 DEFB108BQ8NET1 73 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 LZICQ8WZA0 190 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 DVL3Q92997 716 aaPredicted RBP16.23■□□□□ 0.19
COL27A1-205ENST00000485397 ZMYND19Q96E35 227 aaPredicted RBP16.23■□□□□ 0.19
COL27A1-205ENST00000485397 Q96M85 177 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 MRGBPQ9NV56 204 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 TBCCD1Q9NVR7 557 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 STARD10Q9Y365 291 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 PPIAL4AQ9Y536 164 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 TANC2Q9HCD6 1990 aa16.23■□□□□ 0.19
COL27A1-205ENST00000485397 DOK2O60496 412 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 SASH3O75995 380 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 COX5BP10606 129 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 ZNF26P17031 533 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-205ENST00000485397 GSTM3P21266 225 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 FPR2P25090 351 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 RPL4P36578 427 aaKnown RBP16.22■□□□□ 0.19
COL27A1-205ENST00000485397 SLC9A3P48764 834 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 ERFP50548 548 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 UBA52P62987 128 aaKnown RBP16.22■□□□□ 0.19
COL27A1-205ENST00000485397 AWAT1Q58HT5 328 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 MESTQ5EB52 335 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 ZNF730Q6ZMV8 503 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 ZER1Q7Z7L7 766 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 RNF113BQ8IZP6 322 aaKnown RBP16.22■□□□□ 0.19
COL27A1-205ENST00000485397 POU5F2Q8N7G0 328 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 OR2Z1Q8NG97 314 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 ACOT11Q8WXI4 607 aaPredicted RBP16.22■□□□□ 0.19
COL27A1-205ENST00000485397 SLC7A6Q92536 515 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 RCN3Q96D15 328 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 CMBLQ96DG6 245 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 PATZ1Q9HBE1 687 aaKnown RBP16.22■□□□□ 0.19
COL27A1-205ENST00000485397 GRHPRQ9UBQ7 328 aa16.22■□□□□ 0.19
COL27A1-205ENST00000485397 PPIAL4EA0A075B759 164 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 PPIAL4CA0A0B4J2A2 164 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 PPIAL4DF5H284 164 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 TRAPPC2LH3BP13 241 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 SGCEO43556 437 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 ZNF682O95780 498 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 CD14P08571 375 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 PPIAL4FP0DN26 164 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 CTLA4P16410 223 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 KITLGP21583 273 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 SEC61A1P61619 476 aaKnown RBP16.21■□□□□ 0.19
COL27A1-205ENST00000485397 SCRN3Q0VDG4 424 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 C1orf94Q6P1W5 598 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 MBOAT2Q6ZWT7 520 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 VASH1Q7L8A9 365 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-205ENST00000485397 SLC15A3Q8IY34 581 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 ZNF283Q8N7M2 679 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 SIGLECL1Q8N7X8 197 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 NPEPL1Q8NDH3 523 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 ITLN1Q8WWA0 313 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 SAMD8Q96LT4 415 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 WACQ9BTA9 647 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 DDX28Q9NUL7 540 aaKnown RBP16.21■□□□□ 0.19
COL27A1-205ENST00000485397 ARMCX1Q9P291 453 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 CAPN7Q9Y6W3 813 aa16.21■□□□□ 0.19
COL27A1-205ENST00000485397 CXCR6O00574 342 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 IMPA2O14732 288 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 WIPF1O43516 503 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 TNFRSF1AP19438 455 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 TNFSF4P23510 183 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 LIPEQ05469 1076 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 ZNF154Q13106 437 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 ZBED5Q49AG3 693 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 IFI44LQ53G44 452 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 TMPRSS11FQ6ZWK6 438 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 FAM122BQ7Z309 247 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 LRRC28Q86X40 367 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-205ENST00000485397 SPICQ8N5J4 248 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 FAM156AQ8NDB6 213 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 SGMS2Q8NHU3 365 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 POP5Q969H6 163 aaKnown RBP16.2■□□□□ 0.18
COL27A1-205ENST00000485397 RASD2Q96D21 266 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 ZNF570Q96NI8 536 aa16.2■□□□□ 0.18
COL27A1-205ENST00000485397 SIGLEC11Q96RL6 698 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms