RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TNFRSF18Q9Y5U5 241 aa4.35□□□□□ -1.71
PTPN4-210ENST00000485247 STAB2Q8WWQ8 2551 aa4.35□□□□□ -1.71
PTPN4-210ENST00000485247 IQCMA0A1B0GVH7 501 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 CFAP73A6NFT4 308 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 CCDC154A6NI56 674 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 DUXAA6NLW8 204 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 FTCDNL1E5RQL4 147 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 CFLARO15519 480 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 ANGPTL7O43827 346 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 AHSA1O95433 338 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 DUS4LO95620 317 aaKnown RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 C6orf47O95873 294 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 CYB5R3P00387 301 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 FBP1P09467 338 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 LAMP1P11279 417 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 HLA-DOBP13765 273 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 UQCRBP14927 111 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 SDC1P18827 310 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 CBLP22681 906 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 CPT2P23786 658 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 SOAT1P35610 550 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 CRATP43155 626 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 RPS5P46782 204 aaKnown RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 SERPINB8P50452 374 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 PKNOX1P55347 436 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 ARF6P62330 175 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 DR1Q01658 176 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 SMU1Q2TAY7 513 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 AP1ARQ63HQ0 302 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 WDR25Q64LD2 544 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 ATG16L1Q676U5 607 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 TMEM53Q6P2H8 277 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 CALHM3Q86XJ0 350 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 PTOV1Q86YD1 416 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 ZNF101Q8IZC7 436 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 LNX2Q8N448 690 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 SLC22A24Q8N4F4 322 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 PAPD5Q8NDF8 572 aaKnown RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 OR7A2PQ8NGA2 310 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 OR6N1Q8NGY5 312 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 PSMA8Q8TAA3 256 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 ZNF420Q8TAQ5 688 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 PNPT1Q8TCS8 783 aaKnown RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 KLF14Q8TD94 323 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 ACTRT1Q8TDG2 376 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 ITLN1Q8WWA0 313 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 XAGE5Q8WWM1 108 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 DPF1Q92782 380 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 TXNDC15Q96J42 360 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 C3orf30Q96M34 536 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 TECTBQ96PL2 329 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 MRPL57Q9BQC6 102 aaKnown RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 AIFM2Q9BRQ8 373 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 OR2J1Q9GZK6 312 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 TCF7L2Q9NQB0 619 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 RRAGDQ9NQL2 400 aaPredicted RBP4.34□□□□□ -1.71
PTPN4-210ENST00000485247 STK38LQ9Y2H1 464 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 SNX24Q9Y343 169 aa4.34□□□□□ -1.71
PTPN4-210ENST00000485247 IGHV3-64DA0A0J9YX35 117 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 A0A1W2PRD5 423 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 A0A1W2PRF3 423 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 A0A1W2PRM7 423 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF726A6NNF4 738 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 FAAHO00519 579 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 PHYHO14832 338 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 TIMM8AO60220 97 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-210ENST00000485247 NPIPB7O75200 414 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 PTHP01270 115 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 IFNW1P05000 195 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 LIPFP07098 398 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 GSTA2P09210 222 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 CCDC159P0C7I6 412 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 GKN3PP0CG01 181 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 TNFSF4P23510 183 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 APLNRP35414 380 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 WNT5AP41221 380 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF75DP51815 510 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 PRB3Q04118 309 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-210ENST00000485247 EPS8Q12929 822 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 NAB1Q13506 487 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 LY6EQ16553 131 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 GSTA3Q16772 222 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 RFTN2Q52LD8 501 aaPredicted RBP4.33□□□□□ -1.72
PTPN4-210ENST00000485247 XKR7Q5GH72 579 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 MTX3Q5HYI7 312 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 FAM201AQ5SY85 155 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 ATAD3BQ5T9A4 648 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 LIPMQ5VYY2 423 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 LYPD2Q6UXB3 125 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF841Q6ZN19 808 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 C6orf120Q7Z4R8 191 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 SNX32Q86XE0 403 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 VRK2Q86Y07 508 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 UEVLDQ8IX04 471 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 SCAIQ8N9R8 606 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
PTPN4-210ENST00000485247 C19orf18Q8NEA5 215 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 OR5R1Q8NH85 324 aa4.33□□□□□ -1.72
PTPN4-210ENST00000485247 MFSD8Q8NHS3 518 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms