RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 A8MXK9 166 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 IGHMP01871 453 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 PPIAL4GP0DN37 164 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 NR2C1P13056 603 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF12P17014 697 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 FUT1P19526 365 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 CD247P20963 164 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 RBM34P42696 430 aaKnown RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 SLC6A9P48067 706 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 GDI2P50395 445 aaKnown RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 IL13RA1P78552 427 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 PSG4Q00888 419 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF154Q13106 437 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 CDK5R2Q13319 367 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 TAF11Q15544 211 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 PDLIM3Q53GG5 364 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 KLF17Q5JT82 389 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 ZER1Q7Z7L7 766 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 LRRC28Q86X40 367 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 ALDH16A1Q8IZ83 802 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 SPICQ8N5J4 248 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF283Q8N7M2 679 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 ICA1LQ8NDH6 482 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 FNDC8Q8TC99 324 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 C22orf15Q8WYQ4 148 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 MCUR1Q96AQ8 359 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 SAMD8Q96LT4 415 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 C1orf147Q96MC9 270 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF583Q96ND8 569 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 OR2J1Q9GZK6 312 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 POLR2J2Q9GZM3 115 aaKnown RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 POLR2J3Q9H1A7 115 aaKnown RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 PATZ1Q9HBE1 687 aaKnown RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 CCNB1IP1Q9NPC3 277 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 MMP26Q9NRE1 261 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 INIPQ9NRY2 104 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 SAMD4AQ9UPU9 718 aaKnown RBP10.99□□□□□ -0.65
HDAC6-227ENST00000485102 AUP1Q9Y679 476 aa10.99□□□□□ -0.65
HDAC6-227ENST00000485102 HTR3EA5X5Y0 456 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 MCIDASD6RGH6 385 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 TRAPPC2LH3BP13 241 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 OR7A10O76100 309 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 OPN1SWP03999 348 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 F13BP05160 661 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 CST2P09228 141 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 UMPSP11172 480 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 CCNOP22674 350 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 PPP1CBP62140 327 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 GLO1Q04760 184 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 RABL3Q5HYI8 236 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 SLC25A47Q6Q0C1 308 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 TREML4Q6UXN2 200 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 FOXL2NBQ6ZUU3 175 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 SYT9Q86SS6 491 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 TAMM41Q96BW9 452 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 CDRT15Q96T59 188 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 WACQ9BTA9 647 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 TXNIPQ9H3M7 391 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 GORASP2Q9H8Y8 452 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 ELOVL3Q9HB03 270 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 TMEM106BQ9NUM4 274 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 UBAP1Q9NZ09 502 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 ZNF69Q9UC07 566 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 TIMM10BQ9Y5J6 103 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 INSIG2Q9Y5U4 225 aa10.98□□□□□ -0.65
HDAC6-227ENST00000485102 IGKV1D-43A0A0B4J1Z2 117 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 ISPDA4D126 451 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 DNAJC9-AS1A6NH13 148 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 F5H0A9 414 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-227ENST00000485102 KPNA4O00629 521 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-227ENST00000485102 DNAJC8O75937 253 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-227ENST00000485102 SLC2A10O95528 541 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 NGFP01138 241 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 THRBP10828 461 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 CDAP32320 146 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 KDELR2P33947 212 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 AQP2P41181 271 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 GZMMP51124 257 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 CRYBA2P53672 197 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 PCBD1P61457 104 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 PAX8Q06710 450 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 TRAP1Q12931 704 aaKnown RBP10.97□□□□□ -0.65
HDAC6-227ENST00000485102 SPRNQ5BIV9 151 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 ARMCX4Q5H9R4 360 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 SPATA46Q5T0L3 261 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 ARL9Q6T311 187 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 RFPL4BQ6ZWI9 263 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 KLHL36Q8N4N3 616 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 HDAC2Q92769 488 aaKnown RBP10.97□□□□□ -0.65
HDAC6-227ENST00000485102 SLC25A28Q96A46 364 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 ALG12Q9BV10 488 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 OR2H1Q9GZK4 316 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 WNT5BQ9H1J7 359 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 UNKLQ9H9P5 680 aaKnown RBP10.97□□□□□ -0.65
HDAC6-227ENST00000485102 TBCCD1Q9NVR7 557 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 CMTM6Q9NX76 183 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 TAS2R1Q9NYW7 299 aa10.97□□□□□ -0.65
HDAC6-227ENST00000485102 MMP24Q9Y5R2 645 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms