RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 RCN3Q96D15 328 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 HOPXQ9BPY8 73 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-206ENST00000484733 TMEM5Q9Y2B1 443 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 SVEP1Q4LDE5 3571 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 J3KTA2 159 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 LIPEQ05469 1076 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 PSG7Q13046 419 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 TUSC1Q2TAM9 212 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 ZNF730Q6ZMV8 503 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 PEG10Q86TG7 708 aaKnown RBP9.7□□□□□ -0.86
SCFD1-206ENST00000484733 SAMD8Q96LT4 415 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 COG8Q96MW5 612 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 GAL3ST1Q99999 423 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 RHCGQ9UBD6 479 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 GRHPRQ9UBQ7 328 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 OPN4Q9UHM6 478 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 SNX13Q9Y5W8 968 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 NPTNQ9Y639 398 aa9.7□□□□□ -0.86
SCFD1-206ENST00000484733 TEX13CA0A0J9YWL9 993 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 J3QW42 95 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 FOXH1O75593 365 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 IGHV2-70P01814 119 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 YAP1P46937 504 aaKnown RBP9.69□□□□□ -0.86
SCFD1-206ENST00000484733 TNFAIP6P98066 277 aaPredicted RBP9.69□□□□□ -0.86
SCFD1-206ENST00000484733 HACD2Q6Y1H2 254 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 FAM122BQ7Z309 247 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 ZNF283Q8N7M2 679 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 HAVCR1Q96D42 359 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 ATPIF1Q9UII2 106 aa9.69□□□□□ -0.86
SCFD1-206ENST00000484733 PURGQ9UJV8 347 aaKnown RBP9.69□□□□□ -0.86
SCFD1-206ENST00000484733 PRSS37A4D1T9 235 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 NDUFAB1O14561 156 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 XKRYO14609 159 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 TIMM8AO60220 97 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 PTP4A3O75365 173 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 ABHD16AO95870 558 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 ZNF26P17031 533 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 TNFSF4P23510 183 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 CPT2P23786 658 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 LSM6P62312 80 aaKnown RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 TMEM155Q4W5P6 130 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 MESTQ5EB52 335 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 GPR139Q6DWJ6 353 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 TBPL2Q6SJ96 375 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 CYP4Z1Q86W10 505 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 TREML1Q86YW5 311 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 ST7LQ8TDW4 575 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 ZMYND19Q96E35 227 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 DCLRE1CQ96SD1 692 aaKnown RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 GPX7Q96SL4 187 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 GMPR2Q9P2T1 348 aaKnown RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 ENPP4Q9Y6X5 453 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 IFNL4K9M1U5 179 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 CDC42EP2O14613 210 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 GSTA4O15217 222 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 SGCEO43556 437 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 COX4I1P13073 169 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 ADRA2CP18825 462 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 TNFRSF1AP19438 455 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 RPL4P36578 427 aaKnown RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 AQP6Q13520 282 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 KCNMB1Q16558 191 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 SPRNQ5BIV9 151 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 VASH1Q7L8A9 365 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 TSEN54Q7Z6J9 526 aaKnown RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 LRRC28Q86X40 367 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 PTP4A1Q93096 173 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 HSH2DQ96JZ2 352 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 Q96M85 177 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 ZNF570Q96NI8 536 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 POFUT1Q9H488 388 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 C7orf69Q9H7B7 122 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 PATZ1Q9HBE1 687 aaKnown RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 MSL2Q9HCI7 577 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 EMC7Q9NPA0 242 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 NRIP3Q9NQ35 241 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 TMEM106BQ9NUM4 274 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 VSX1Q9NZR4 365 aaPredicted RBP9.68□□□□□ -0.86
SCFD1-206ENST00000484733 IL19Q9UHD0 177 aa9.68□□□□□ -0.86
SCFD1-206ENST00000484733 A0A1W2PRQ8 180 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 NME4O00746 187 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 DOK2O60496 412 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 KHDRBS3O75525 346 aaKnown RBP9.67□□□□□ -0.86
SCFD1-206ENST00000484733 ZNF682O95780 498 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 GPR4P46093 362 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 HTR5AP47898 357 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 ACTG1P63261 375 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 DGCR6Q14129 220 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 FKBP9P1Q75LS8 142 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 RRM2BQ7LG56 351 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 SPICQ8N5J4 248 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 POU5F2Q8N7G0 328 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 POP5Q969H6 163 aaKnown RBP9.67□□□□□ -0.86
SCFD1-206ENST00000484733 EFCAB1Q9HAE3 211 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 NMNAT1Q9HAN9 279 aaPredicted RBP9.67□□□□□ -0.86
SCFD1-206ENST00000484733 ARMCX1Q9P291 453 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 SIGLEC7Q9Y286 467 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 STARD10Q9Y365 291 aa9.67□□□□□ -0.86
SCFD1-206ENST00000484733 ADAM18Q9Y3Q7 739 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms