RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 IL13RA1P78552 427 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 S100A12P80511 92 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 ERV3-1Q14264 604 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 CDNFQ49AH0 187 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 WBP2NLQ6ICG8 309 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 OR52W1Q6IF63 320 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 TMPPEQ6ZT21 453 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 SFTPA2Q8IWL1 248 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 BAHD1Q8TBE0 780 aaPredicted RBP17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 SFT2D1Q8WV19 159 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 TMED6Q8WW62 240 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 TAAR8Q969N4 342 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 CMBLQ96DG6 245 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 SLCO5A1Q9H2Y9 848 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 CYTL1Q9NRR1 136 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 KNL1Q8NG31 2342 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 APBB3O95704 486 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 RENP00797 406 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 IGFBP3P17936 291 aaPredicted RBP17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 MST1LQ2TV78 715 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 TEX30Q5JUR7 227 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 RTL10Q7L3V2 364 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 ACBD4Q8NC06 268 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 C16orf52Q8NHV5 167 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 STOML3Q8TAV4 291 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 RNF128Q8TEB7 428 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 RSC1A1Q92681 617 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 CNTNAP3BQ96NU0 1288 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 FAM96BQ9Y3D0 163 aa17.76■□□□□ 0.43
RPUSD3-216ENST00000484134 PLGP00747 810 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 HLA-DQA2P01906 255 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 FAM157CP0CG43 387 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 SPOCK1Q08629 439 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 DEFB115Q30KQ5 88 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 ZNF761Q86XN6 746 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 ZNF584Q8IVC4 421 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 ARL11Q969Q4 196 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 RNF126Q9BV68 326 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 FN3KRPQ9HA64 309 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 TREM1Q9NP99 234 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 ZFP57Q9NU63 452 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 CSAG2Q9Y5P2 127 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 TBC1D3DA0A087WVF3 549 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 A0A0B4J2A0 478 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 A6NCN8 305 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 TBC1D3LB9A6J9 549 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 EIF3GO75821 320 aaKnown RBP eCLIP17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 ERCC1P07992 297 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 TBC1D3HP0C7X1 549 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 CD37P11049 281 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 PNMTP11086 282 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 CTNNB1P35222 781 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 DEFB110Q30KQ9 67 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 EMC4Q5J8M3 183 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 TBC1D3CQ6IPX1 549 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 ADGRE4PQ86SQ3 457 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 ZNF679Q8IYX0 411 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 TBC1D3Q8IZP1 549 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 SLC30A7Q8NEW0 376 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 OR4K17Q8NGC6 315 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 NKD1Q969G9 470 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 FOXRED1Q96CU9 486 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 UQCC1Q9NVA1 299 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 SHPKQ9UHJ6 478 aa17.75■□□□□ 0.43
RPUSD3-216ENST00000484134 EFSO43281 561 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 TACR3P29371 465 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 CENPAP49450 140 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 PDZK1IP1Q13113 114 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 SQSTM1Q13501 440 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 NKAPLQ5M9Q1 402 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 AVPI1Q5T686 147 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 C1QL3Q5VWW1 255 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 FJX1Q86VR8 437 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 BAP18Q8IXM2 172 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 ELP5Q8TE02 316 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 SLC25A44Q96H78 314 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 PHB2Q99623 299 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 MRPL22Q9NWU5 206 aaKnown RBP17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 SLC2A8Q9NY64 477 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 FREM3P0C091 2139 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 TEX13DA0A0J9YY54 714 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 C13orf42A0A1B0GVH6 325 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 LMX1BO60663 402 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 SNAPINO95295 136 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 CRHP06850 196 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 ACAA1P09110 424 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 NAT2P11245 290 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 AKR1C4P17516 323 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 VAMP1P23763 118 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 PSMB6P28072 239 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 ADAM8P78325 824 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 BTG2P78543 158 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 RNASE10Q5GAN6 216 aaKnown RBP17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 FNDC7Q5VTL7 733 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 JAGN1Q8N5M9 183 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 NUDT9Q9BW91 350 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 PCOLCE2Q9UKZ9 415 aa17.74■□□□□ 0.43
RPUSD3-216ENST00000484134 HSPB2A8KAH6 182 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 H0YIZ8 118 aa17.73■□□□□ 0.43
RPUSD3-216ENST00000484134 PLRG1O43660 514 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms