RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 C11orf71Q6IPW1 123 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 ICA1LQ8NDH6 482 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 GJC3Q8NFK1 279 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 OR9Q1Q8NGQ5 310 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 POM121L2Q96KW2 1035 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 PKP2Q99959 881 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 OSBPL10Q9BXB5 764 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 NMNAT2Q9BZQ4 307 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 EIF3KQ9UBQ5 218 aaKnown RBP18.05■□□□□ 0.48
SEC13-217ENST00000482647 NDRG4Q9ULP0 352 aaKnown RBP18.05■□□□□ 0.48
SEC13-217ENST00000482647 OAZ3Q9UMX2 235 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 CMAHPQ9Y471 501 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 PMF1-BGLAPU3KQ54 211 aa18.05■□□□□ 0.48
SEC13-217ENST00000482647 LOC100509620A0A075B734 347 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 COX5BP10606 129 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 ZNF823P16415 610 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 BLVRAP53004 296 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 UCP2P55851 309 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 ATP5J2P56134 94 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 SNRPD2P62316 118 aaKnown RBP18.04■□□□□ 0.48
SEC13-217ENST00000482647 MEP1BQ16820 701 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 SWI5Q1ZZU3 235 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 MST1LQ2TV78 715 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 SHEQ5VZ18 495 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 KDM4DQ6B0I6 523 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 UNQ6126/PRO20091Q6UXV3 157 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 OR51L1Q8NGJ5 315 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 CACNG6Q9BXT2 260 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 PLK3Q9H4B4 646 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 SLC25A19Q9HC21 320 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 S100A14Q9HCY8 104 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 PLEK2Q9NYT0 353 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 ENOPH1Q9UHY7 261 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 FBXO9Q9UK97 447 aaPredicted RBP18.04■□□□□ 0.48
SEC13-217ENST00000482647 CELSR1Q9NYQ6 3014 aa18.04■□□□□ 0.48
SEC13-217ENST00000482647 SURF4O15260 269 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 DOK2O60496 412 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 FAM157BP0CG42 384 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 SPI1P17947 270 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 ZSCAN26Q16670 478 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 ARL9Q6T311 187 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 PRSS57Q6UWY2 283 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 VASH1Q7L8A9 365 aaPredicted RBP18.03■□□□□ 0.48
SEC13-217ENST00000482647 OR2AJ1Q8NGZ0 328 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 OTULINQ96BN8 352 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 PLEKHA8Q96JA3 519 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 BCL2L14Q9BZR8 327 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 KCNG2Q9UJ96 466 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 LHFPL6Q9Y693 200 aa18.03■□□□□ 0.48
SEC13-217ENST00000482647 USF3Q68DE3 2245 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 SAC3D1A6NKF1 404 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 FAM183AA6NL82 134 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 RER1O15258 196 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 GPRIN2O60269 458 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 MITFO75030 526 aaPredicted RBP18.02■□□□□ 0.48
SEC13-217ENST00000482647 GYPBP06028 91 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 FMO3P31513 532 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 GGT2P36268 569 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 HTR5AP47898 357 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 PRRC2AP48634 2157 aaKnown RBP18.02■□□□□ 0.48
SEC13-217ENST00000482647 HIST1H3AP68431 136 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 PTGES3Q15185 160 aaKnown RBP18.02■□□□□ 0.48
SEC13-217ENST00000482647 CCDC92Q53HC0 331 aaPredicted RBP18.02■□□□□ 0.48
SEC13-217ENST00000482647 Q5PR19 223 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 HIST2H3PS2Q5TEC6 136 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 TMEM236Q5W0B7 351 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 HIST2H3AQ71DI3 136 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 OR1F12Q8NHA8 337 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 ZNRF4Q8WWF5 429 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 PTP4A1Q93096 173 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 MRPL24Q96A35 216 aaKnown RBP18.02■□□□□ 0.48
SEC13-217ENST00000482647 RBM4BQ9BQ04 359 aaKnown RBP18.02■□□□□ 0.48
SEC13-217ENST00000482647 MRPL22Q9NWU5 206 aaKnown RBP18.02■□□□□ 0.48
SEC13-217ENST00000482647 CYB5R1Q9UHQ9 305 aa18.02■□□□□ 0.48
SEC13-217ENST00000482647 ITPR3Q14573 2671 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 OR6C6A6NF89 314 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 PRR23D1E9PI22 279 aaPredicted RBP18.01■□□□□ 0.47
SEC13-217ENST00000482647 H7C417 338 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 LCKP06239 509 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 PRR23D2P0DMB1 279 aaPredicted RBP18.01■□□□□ 0.47
SEC13-217ENST00000482647 IGFBP5P24593 272 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 EVX1P49640 407 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 ADAM8P78325 824 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 RAB35Q15286 201 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 SNAPC1Q16533 368 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 RGS7BPQ6MZT1 257 aaPredicted RBP18.01■□□□□ 0.47
SEC13-217ENST00000482647 CORO6Q6QEF8 472 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 C1orf174Q8IYL3 243 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 OR6K6Q8NGW6 343 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 STMN2Q93045 179 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 OR51B6Q9H340 312 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 TVP23BQ9NYZ1 205 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 ARID1AO14497 2285 aa18.01■□□□□ 0.47
SEC13-217ENST00000482647 TVP23AA6NH52 213 aa18■□□□□ 0.47
SEC13-217ENST00000482647 SYNGR3O43761 229 aa18■□□□□ 0.47
SEC13-217ENST00000482647 CLUP10909 449 aa18■□□□□ 0.47
SEC13-217ENST00000482647 SELENOVP59797 346 aa18■□□□□ 0.47
SEC13-217ENST00000482647 PPP2R2BQ00005 443 aa18■□□□□ 0.47
SEC13-217ENST00000482647 ELFN2Q5R3F8 820 aa18■□□□□ 0.47
SEC13-217ENST00000482647 SLC18B1Q6NT16 456 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms