RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GABRG1Q8N1C3 465 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 KDM8Q8N371 416 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 COQ8AQ8NI60 647 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 ABHD6Q9BV23 337 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 VSX1Q9NZR4 365 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-220ENST00000482507 LRP12Q9Y561 859 aa13.34□□□□□ -0.27
ATG4B-220ENST00000482507 TMED7-TICAM2A0A0A6YYA0 188 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 SLC22A23A1A5C7 686 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 TLCD2A6NGC4 264 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 LILRA5A6NI73 299 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 HMSDA8MTL9 139 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 ALG1L2C9J202 215 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 LMX1BO60663 402 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 B3GALNT1O75752 331 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 DXOO77932 396 aaKnown RBP13.33□□□□□ -0.27
ATG4B-220ENST00000482507 LPLP06858 475 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 GABRA1P14867 456 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 ADAM8P78325 824 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 OR10K2Q6IF99 312 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 CATSPERDQ86XM0 798 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 GALNT16Q8N428 558 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 DUSP19Q8WTR2 217 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 ARL6Q9H0F7 186 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 ZMAT3Q9HA38 289 aaKnown RBP13.33□□□□□ -0.27
ATG4B-220ENST00000482507 CDV3Q9UKY7 258 aaKnown RBP13.33□□□□□ -0.27
ATG4B-220ENST00000482507 TMED7Q9Y3B3 224 aa13.33□□□□□ -0.27
ATG4B-220ENST00000482507 CFAP54Q96N23 3096 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-220ENST00000482507 LOC101059948A0A1B0GTJ6 334 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 M0QYG6 137 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 ADAM10O14672 748 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 GALR2O43603 387 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-220ENST00000482507 ITGB2P05107 769 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 IGFBP3P17936 291 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-220ENST00000482507 C4BPBP20851 252 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 BIKQ13323 160 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 SQSTM1Q13501 440 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 EIF2B1Q14232 305 aaKnown RBP13.33□□□□□ -0.28
ATG4B-220ENST00000482507 MOGAT2Q3SYC2 334 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 KRT77Q7Z794 578 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 ASB17Q8WXJ9 295 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 TINAGL1Q9GZM7 467 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-220ENST00000482507 TXNIPQ9H3M7 391 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 POFUT1Q9H488 388 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 EXO5Q9H790 373 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 TMEM138Q9NPI0 162 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 DHDHQ9UQ10 334 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 MMACHCQ9Y4U1 282 aa13.33□□□□□ -0.28
ATG4B-220ENST00000482507 ALOX12BO75342 701 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 SRSF10O75494 262 aaKnown RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 OR6A2O95222 327 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 GP1BBP13224 206 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 EPHA8P29322 1005 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 PLCXD2Q0VAA5 305 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 NR0B2Q15466 257 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 C14orf28Q4W4Y0 310 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 C4orf46Q504U0 113 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 LY6G6FQ5SQ64 297 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 C1orf140Q5VVS0 124 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 B3GNTL1Q67FW5 361 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 OGFOD3Q6PK18 319 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 PRSS42Q7Z5A4 293 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 SPERTQ8NA61 448 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 SAP25Q8TEE9 199 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 TNFAIP8L1Q8WVP5 186 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 SLC41A2Q96JW4 573 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 ZNF587Q96SQ5 575 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 TBL1XR1Q9BZK7 514 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 WWTR1Q9GZV5 400 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 COA3Q9Y2R0 106 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 RP1P56715 2156 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 TCRBV16S1A1N1A0A5B0 115 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 TTLL8A6PVC2 850 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 PLPP3O14495 311 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 RP2O75695 350 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 SLC25A12O75746 678 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 HOXD4P09016 255 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 ABCD3P28288 659 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 MPLP40238 635 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 OR1D5P58170 312 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 SORDQ00796 357 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 ELAVL1Q15717 326 aaKnown RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 TUSC1Q2TAM9 212 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 ZNF627Q7L945 461 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 C1orf198Q9H425 327 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 SLC17A5Q9NRA2 495 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 ZNF230Q9UIE0 474 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-220ENST00000482507 FREM3P0C091 2139 aa13.32□□□□□ -0.28
ATG4B-220ENST00000482507 TRAV14DV4A0A0A6YYC5 116 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 DCDC2BA2VCK2 349 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 RHPN2P1A8MT19 583 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 LGALS8O00214 317 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 MT-ATP6P00846 226 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 PPP3CBP16298 524 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 PGCP20142 388 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 HTR2CP28335 458 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 FMODQ06828 376 aa13.31□□□□□ -0.28
ATG4B-220ENST00000482507 PEAR1Q5VY43 1037 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1296.3 ms