RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 C6orf10Q5SRN2 563 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 HHATQ5VTY9 493 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 NANOGNBQ7Z5D8 188 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 KIRREL3Q8IZU9 778 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 C1orf87Q8N0U7 546 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 GALNT4Q8N4A0 578 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 ATG16L2Q8NAA4 619 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 NFKBIDQ8NI38 313 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 CMBLQ96DG6 245 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 ITCHQ96J02 903 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 MEGF10Q96KG7 1140 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 POFUT1Q9H488 388 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 SMURF2Q9HAU4 748 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 TUBG2Q9NRH3 451 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 DNAH3Q8TD57 4116 aa12.39□□□□□ -0.43
HDAC6-224ENST00000481929 PRORSD1PA6NEY8 169 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 CHP2O43745 196 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 TPST2O60704 377 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 TRMUO75648 421 aaKnown RBP12.38□□□□□ -0.43
HDAC6-224ENST00000481929 LIPFP07098 398 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 BMP2P12643 396 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 ACADSP16219 412 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 TGFBR2P37173 567 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 PCBD1P61457 104 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 FAM27BQ5VT28 67 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 METTL11BQ5VVY1 283 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 CD276Q5ZPR3 534 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 LYPD2Q6UXB3 125 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 LINC00114Q6XXX2 140 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 DCDC5Q6ZRR9 648 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 ASB10Q8WXI3 467 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 NSMAFQ92636 917 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 LHX4Q969G2 390 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 PKNOX2Q96KN3 472 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 WDFY2Q96P53 400 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 TECTBQ96PL2 329 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 TBCCD1Q9NVR7 557 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 STX18Q9P2W9 335 aaKnown RBP12.38□□□□□ -0.43
HDAC6-224ENST00000481929 VPREB3Q9UKI3 123 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 NDRG4Q9ULP0 352 aaKnown RBP12.38□□□□□ -0.43
HDAC6-224ENST00000481929 TIMM10BQ9Y5J6 103 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 COL7A1Q02388 2944 aa12.38□□□□□ -0.43
HDAC6-224ENST00000481929 GMNCA6NCL1 334 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 BLOC1S5-TXNDC5H3BN57 136 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 CLIC1O00299 241 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 KPNA4O00629 521 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-224ENST00000481929 FMO6PO60774 539 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 F13BP05160 661 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 CST2P09228 141 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 NR2C1P13056 603 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 EPHA3P29320 983 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 SRP9P49458 86 aaKnown RBP12.37□□□□□ -0.43
HDAC6-224ENST00000481929 NPY4RP50391 375 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 DAP3P51398 398 aaKnown RBP12.37□□□□□ -0.43
HDAC6-224ENST00000481929 GUCY1A3Q02108 690 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 CD47Q08722 323 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 ZNF181Q2M3W8 571 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 REEP3Q6NUK4 255 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 ZNF613Q6PF04 617 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 TTC33Q6PID6 262 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-224ENST00000481929 ZNF841Q6ZN19 808 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 MSANTD1Q6ZTZ1 278 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 MOGAT3Q86VF5 341 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 OR10AD1Q8NGE0 317 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 HAVCR1Q96D42 359 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 WFDC6Q9BQY6 131 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 EVA1AQ9H8M9 152 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 FAM96BQ9Y3D0 163 aa12.37□□□□□ -0.43
HDAC6-224ENST00000481929 LOC100653049A0A140TA62 436 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 WDR91A4D1P6 747 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 SLC22A3O75751 556 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 KRT34O76011 436 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 ASAH2BP0C7U1 165 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 LAP3P28838 519 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 GABRA5P31644 462 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 ETV4P43268 484 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 UGT2B15P54855 530 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 FMODQ06828 376 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 GCNT6Q5T4J0 391 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 OR5AS1Q8N127 324 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 C11orf44Q8N8P7 122 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 PNLDC1Q8NA58 520 aaKnown RBP12.36□□□□□ -0.43
HDAC6-224ENST00000481929 PHF21AQ96BD5 680 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 C16orf45Q96MC5 204 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-224ENST00000481929 COG8Q96MW5 612 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 WWC2-AS2Q96NR7 200 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 SORT1Q99523 831 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 MCHR1Q99705 422 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 C20orf27Q9GZN8 174 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 TOR3AQ9H497 397 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 FBLN5Q9UBX5 448 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 USH1CQ9Y6N9 552 aa12.36□□□□□ -0.43
HDAC6-224ENST00000481929 IGKV1D-43A0A0B4J1Z2 117 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 IGHV3-64DA0A0J9YX35 117 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 ANKRD61A6NGH8 418 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 SDHDO14521 159 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 MPIG6BO95866 241 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 IRF2P14316 349 aa12.35□□□□□ -0.43
HDAC6-224ENST00000481929 GUCA1AP43080 201 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms