RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 NDRG4Q9ULP0 352 aaKnown RBP17.09■□□□□ 0.33
LIME1-205ENST00000480139 ANKRD17O75179 2603 aaKnown RBP17.09■□□□□ 0.33
LIME1-205ENST00000480139 ROS1P08922 2347 aa17.08■□□□□ 0.33
LIME1-205ENST00000480139 DOK2O60496 412 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 APEX1P27695 318 aaKnown RBP17.08■□□□□ 0.32
LIME1-205ENST00000480139 ENTPD1P49961 510 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 HGFACQ04756 655 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 SLC34A1Q06495 639 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 RAB35Q15286 201 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 ZIK1Q3SY52 487 aaPredicted RBP17.08■□□□□ 0.32
LIME1-205ENST00000480139 NXNL2Q5VZ03 156 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 OTPQ5XKR4 325 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 LPCAT4Q643R3 524 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 ZNF774Q6NX45 483 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 ZNF544Q6NX49 715 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 B3GLCTQ6Y288 498 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 VASH1Q7L8A9 365 aaPredicted RBP17.08■□□□□ 0.32
LIME1-205ENST00000480139 TCEANCQ8N8B7 351 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 OR8J1Q8NGP2 316 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 TRUB1Q8WWH5 349 aaKnown RBP17.08■□□□□ 0.32
LIME1-205ENST00000480139 NEUROG1Q92886 237 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 POM121L2Q96KW2 1035 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 PITX2Q99697 317 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 DHRS9Q9BPW9 319 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 CDADC1Q9BWV3 514 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 HDHD2Q9H0R4 259 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 OR51V1Q9H2C8 321 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 RNPEPL1Q9HAU8 725 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 SMPD3Q9NY59 655 aaPredicted RBP17.08■□□□□ 0.32
LIME1-205ENST00000480139 PLEK2Q9NYT0 353 aa17.08■□□□□ 0.32
LIME1-205ENST00000480139 OR6C6A6NF89 314 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 TVP23AA6NH52 213 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 E7EQL1 145 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 RER1O15258 196 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 SYNGR3O43761 229 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 TLX2O43763 284 aaPredicted RBP17.07■□□□□ 0.32
LIME1-205ENST00000480139 ICMTO60725 284 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 TMCC2O75069 709 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 NR4A1P22736 598 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 PCSK6P29122 969 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 GSTT1P30711 240 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 GDI2P50395 445 aaKnown RBP17.07■□□□□ 0.32
LIME1-205ENST00000480139 NKX6-1P78426 367 aaPredicted RBP17.07■□□□□ 0.32
LIME1-205ENST00000480139 CCDC92Q53HC0 331 aaPredicted RBP17.07■□□□□ 0.32
LIME1-205ENST00000480139 AADACL4Q5VUY2 407 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 LYPD4Q6UWN0 246 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.07■□□□□ 0.32
LIME1-205ENST00000480139 ZNF511Q8NB15 262 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 BBS1Q8NFJ9 593 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 OR2AJ1Q8NGZ0 328 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 NINJ1Q92982 152 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 ZNF442Q9H7R0 627 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 WDR76Q9H967 626 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 CDH20Q9HBT6 801 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 CA10Q9NS85 328 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 FAIMQ9NVQ4 179 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 NKX1-2Q9UD57 310 aaPredicted RBP17.07■□□□□ 0.32
LIME1-205ENST00000480139 ST6GALNAC2Q9UJ37 374 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 GDF2Q9UK05 429 aaPredicted RBP17.07■□□□□ 0.32
LIME1-205ENST00000480139 SPEF1Q9Y4P9 236 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 ATP23Q9Y6H3 246 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 LRBAP50851 2863 aa17.07■□□□□ 0.32
LIME1-205ENST00000480139 POLQO75417 2590 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 LOC100509620A0A075B734 347 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 M0R129 80 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 DLGAP1O14490 977 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 RAF1P04049 648 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 GALK2Q01415 458 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 RIPK1Q13546 671 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 APOFQ13790 326 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 LRRC36Q1X8D7 754 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 KLHL12Q53G59 568 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 ELFN2Q5R3F8 820 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 LCN1P1Q5VSP4 162 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 CORO6Q6QEF8 472 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 GID4Q8IVV7 300 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 TIGD4Q8IY51 512 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 OR1F12Q8NHA8 337 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 FAM81AQ8TBF8 368 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 IGFBPL1Q8WX77 278 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 NRGNQ92686 78 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 INTS14Q96SY0 518 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 TEAD3Q99594 435 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 COQ7Q99807 217 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 LIME1Q9H400 295 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 SPG11Q96JI7 2443 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 PDZD2O15018 2839 aa17.06■□□□□ 0.32
LIME1-205ENST00000480139 C5orf49A4QMS7 147 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 ZNF593O00488 134 aaPredicted RBP17.05■□□□□ 0.32
LIME1-205ENST00000480139 SLC16A6O15403 523 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 DANCRP0C864 163 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 HTR5AP47898 357 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 RPS7P62081 194 aaKnown RBP17.05■□□□□ 0.32
LIME1-205ENST00000480139 RPS23P62266 143 aaKnown RBP17.05■□□□□ 0.32
LIME1-205ENST00000480139 ECH1Q13011 328 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 KEAP1Q14145 624 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 GGTLC2Q14390 218 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 SLC25A30Q5SVS4 291 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 CFAP77Q6ZQR2 320 aa17.05■□□□□ 0.32
LIME1-205ENST00000480139 MEPCEQ7L2J0 689 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms