RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 C1orf159Q96HA4 380 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 C4orf45Q96LM5 186 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 ERMAPQ96PL5 475 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-211ENST00000477612 TRIM15Q9C019 465 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 MAGIXQ9H6Y5 334 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 ELOVL3Q9HB03 270 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 PRPF19Q9UMS4 504 aaKnown RBP18.58■□□□□ 0.56
COL9A3-211ENST00000477612 LYVE1Q9Y5Y7 322 aa18.58■□□□□ 0.56
COL9A3-211ENST00000477612 IDH3BO43837 385 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 NCR1O76036 304 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 PPP1R3DO95685 299 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 ZNF16P17020 682 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-211ENST00000477612 TUBG1P23258 451 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 CRABP1P29762 137 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 TMEM33P57088 247 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 MS4A2Q01362 244 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 CHRFAM7AQ494W8 412 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 TMEM255AQ5JRV8 349 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 PGBD2Q6P3X8 592 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 FANK1Q8TC84 345 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 KLF14Q8TD94 323 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-211ENST00000477612 SNX33Q8WV41 574 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 TUBG2Q9NRH3 451 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 TBCCD1Q9NVR7 557 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 KLHL21Q9UJP4 597 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 CDC42EP3Q9UKI2 254 aa18.57■□□□□ 0.56
COL9A3-211ENST00000477612 TANC2Q9HCD6 1990 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 KIAA1324LA8MWY0 1029 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-211ENST00000477612 SGCEO43556 437 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 LMX1BO60663 402 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 RP2O75695 350 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 NGFP01138 241 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 GCH1P30793 250 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 MAGEB1P43366 347 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 MMP15P51511 669 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 PPP1CBP62140 327 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 ALKBH6Q3KRA9 238 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 FAM166AQ6J272 317 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 TMEM154Q6P9G4 183 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 PGM2L1Q6PCE3 622 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 ARL9Q6T311 187 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 ZNF620Q6ZNG0 422 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 RFPL4BQ6ZWI9 263 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 VASH1Q7L8A9 365 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-211ENST00000477612 DHFR2Q86XF0 187 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 ICA1LQ8NDH6 482 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 OR4C15Q8NGM1 316 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 YIPF5Q969M3 257 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 SOX7Q9BT81 388 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 OR2J1Q9GZK6 312 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 RACGAP1Q9H0H5 632 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 TAS2R1Q9NYW7 299 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 B9D1Q9UPM9 204 aa18.56■□□□□ 0.56
COL9A3-211ENST00000477612 IGLV1-36A0A0B4J1U3 117 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 LRP5LA4QPB2 252 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 DCTN6O00399 190 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 DOK2O60496 412 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 MPZL1O95297 269 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 GAAP10253 952 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 LIPAP38571 399 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 MPV17P39210 176 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 HIST1H3AP68431 136 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 TRIP10Q15642 601 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 HIST2H3PS2Q5TEC6 136 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 ZNF770Q6IQ21 691 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-211ENST00000477612 DNM1P34Q6PK57 102 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 HIST2H3AQ71DI3 136 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 IPCEF1Q8WWN9 437 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-211ENST00000477612 SAMD8Q96LT4 415 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 IL20Q9NYY1 176 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 LPAR3Q9UBY5 353 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 CGGBP1Q9UFW8 167 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-211ENST00000477612 ATPIF1Q9UII2 106 aa18.55■□□□□ 0.56
COL9A3-211ENST00000477612 LOC100289279A0A1B0GTE1 492 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 OR6C6A6NF89 314 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 TNFRSF11BO00300 401 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 MT-ND5P03915 603 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 ADH4P08319 380 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 HIST1H1CP16403 213 aaKnown RBP18.54■□□□□ 0.56
COL9A3-211ENST00000477612 CRYBB2P43320 205 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 ARHGDIAP52565 204 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 CCDC92Q53HC0 331 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-211ENST00000477612 FAM209AQ5JX71 171 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 RPL13AP3Q6NVV1 102 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 ZBTB46Q86UZ6 589 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 OR6V1Q8N148 313 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 ABHD4Q8TB40 342 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 ASB9Q96DX5 294 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 TSSK2Q96PF2 358 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 NMNAT3Q96T66 252 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 BTBD10Q9BSF8 475 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 RERGLQ9H628 205 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 CYSLTR2Q9NS75 346 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 ZNF275Q9NSD4 429 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-211ENST00000477612 PLEK2Q9NYT0 353 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 ASH2LQ9UBL3 628 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 KCNS2Q9ULS6 477 aa18.54■□□□□ 0.56
COL9A3-211ENST00000477612 RENP00797 406 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 FAM157CP0CG43 387 aa18.53■□□□□ 0.56
COL9A3-211ENST00000477612 IL2RGP31785 369 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms