RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TRIOO75962 3097 aa3.16□□□□□ -1.9
UBR3-209ENST00000477461 UNC80Q8N2C7 3258 aa3.15□□□□□ -1.9
UBR3-209ENST00000477461 A0A096LPI6 279 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 C15orf38-AP3S2A0A0A6YYH1 394 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 IGHV3-38A0A0C4DH36 116 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 VSTM2BA6NLU5 285 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 WASHC1A8K0Z3 465 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 EVPLLA8MZ36 301 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 EMC8O43402 210 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 BCAS2O75934 225 aaPredicted RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 STAMBPO95630 424 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 KRT75O95678 551 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 NPPAP01160 153 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 KRT16P08779 473 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 UQCRC2P22695 453 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 PPIBP23284 216 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 PTPN4P29074 926 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 OTX2P32243 289 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 FRKP42685 505 aaPredicted RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 NPBWR1P48145 328 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 CCT3P49368 545 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 NUDT2P50583 147 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 HNRNPFP52597 415 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 IGLV3-21P80748 117 aaPredicted RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 ZNHIT3Q15649 155 aaPredicted RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 FAM189A2Q15884 450 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 TRMT5Q32P41 509 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 MS4A18Q3C1V0 323 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 SFT2D3Q587I9 215 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 ARMCX4Q5H9R4 360 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 COQ5Q5HYK3 327 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 C1QTNF12Q5T7M4 302 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 REP15Q6BDI9 236 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 TMEM107Q6UX40 140 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 NHLRC1Q6VVB1 395 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 LANCL3Q6ZV70 420 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 TIPARPQ7Z3E1 657 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 C5orf24Q7Z6I8 188 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 ARPINQ7Z6K5 226 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 ANKRD37Q7Z713 158 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 DHDDSQ86SQ9 333 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 SLC25A42Q86VD7 318 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 KRTAP11-1Q8IUC1 163 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 FUNDC1Q8IVP5 155 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 DND1Q8IYX4 353 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 CLECL1Q8IZS7 167 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 OR9A2Q8NGT5 310 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 OR2Y1Q8NGV0 311 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 SFXN5Q8TD22 340 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 ZNF675Q8TD23 568 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 FGF11Q92914 225 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 TSLPQ969D9 159 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 UCN3Q969E3 161 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 TOMM40LQ969M1 308 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 MCUR1Q96AQ8 359 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 PPWD1Q96BP3 646 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 ROPN1LQ96C74 230 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 RCN3Q96D15 328 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 SLC35G5Q96KT7 338 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 CCDC115Q96NT0 180 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 AMDHD1Q96NU7 426 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 IP6K3Q96PC2 410 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 NPAS2Q99743 824 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 SH3GL1Q99961 368 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 SLC35A5Q9BS91 424 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 OR8D2Q9GZM6 311 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 GLIPR2Q9H4G4 154 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 ZNF385DQ9H6B1 395 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 AKIRIN1Q9H9L7 192 aaPredicted RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 IL1RL2Q9HB29 575 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 GPN1Q9HCN4 374 aaPredicted RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 ADAP2Q9NPF8 381 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 ASCL3Q9NQ33 180 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 ZCCHC3Q9NUD5 404 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 DDX18Q9NVP1 670 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 TAS2R9Q9NYW1 312 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 CTSZQ9UBR2 303 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 DNAJB9Q9UBS3 223 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 KLK11Q9UBX7 282 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 UBQLN2Q9UHD9 624 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 BCAP29Q9UHQ4 241 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 PRO0461Q9UI25 63 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 ANGPTL2Q9UKU9 493 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 CES1P1Q9UKY3 287 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 LIPT1Q9Y234 373 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 CFL2Q9Y281 166 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 AP3M1Q9Y2T2 418 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 MRPS18CQ9Y3D5 142 aaKnown RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 L3MBTL1Q9Y468 752 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 KLF2Q9Y5W3 355 aaPredicted RBP3.15□□□□□ -1.91
UBR3-209ENST00000477461 AHCTF1Q8WYP5 2266 aa3.15□□□□□ -1.91
UBR3-209ENST00000477461 IGKV3D-11A0A0A0MRZ8 115 aa3.14□□□□□ -1.91
UBR3-209ENST00000477461 NSG1A0A0A6YYJ2 146 aa3.14□□□□□ -1.91
UBR3-209ENST00000477461 RNF103-CHMP3A0A140T963 221 aa3.14□□□□□ -1.91
UBR3-209ENST00000477461 ERICH4A6NGS2 130 aa3.14□□□□□ -1.91
UBR3-209ENST00000477461 SAGE2PA6NJ88 616 aa3.14□□□□□ -1.91
UBR3-209ENST00000477461 SHISA9B4DS77 424 aa3.14□□□□□ -1.91
UBR3-209ENST00000477461 C5orf58C9J3I9 102 aa3.14□□□□□ -1.91
UBR3-209ENST00000477461 E5RGE8 158 aa3.14□□□□□ -1.91
UBR3-209ENST00000477461 FBP2O00757 339 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms