RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 HMOX2P30519 316 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 CYB561P49447 251 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 CLDN8P56748 225 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 UBE2UQ5VVX9 321 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 OR52W1Q6IF63 320 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 TTC23LQ6PF05 361 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 TMCO2Q7Z6W1 182 aaPredicted RBP3.75□□□□□ -1.81
VPS50-212ENST00000476413 C8orf31Q8N9H6 132 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 EEF1AKMT3Q96AZ1 226 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 DNAJC1Q96KC8 554 aaKnown RBP3.75□□□□□ -1.81
VPS50-212ENST00000476413 SLC7A5P2Q9GIP4 190 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 TPK1Q9H3S4 243 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 NOX3Q9HBY0 568 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 TUBG2Q9NRH3 451 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 IGHV3-74A0A0B4J1X5 117 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 IGHV3-66A0A0C4DH42 116 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 A0A1B0GTQ1 180 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 INS-IGF2F8WCM5 200 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 TMX2-CTNND1H3BSU7 103 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 FLOT1O75955 427 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 PLEKP08567 350 aaPredicted RBP3.74□□□□□ -1.81
VPS50-212ENST00000476413 GZMAP12544 262 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 NBL1P41271 181 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 UBE2AP49459 152 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 PON2Q15165 354 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 TSPO2Q5TGU0 170 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 SPESP1Q6UW49 350 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 Q8N9L7 120 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 NOXO1Q8NFA2 376 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 GLYATL2Q8WU03 294 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 ZYG11BQ9C0D3 744 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 ACP6Q9NPH0 428 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 AGPAT4Q9NRZ5 378 aa3.74□□□□□ -1.81
VPS50-212ENST00000476413 UBN2Q6ZU65 1347 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 A0A1B0GVX0 72 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 SLC9A3R1O14745 358 aaPredicted RBP3.73□□□□□ -1.81
VPS50-212ENST00000476413 FCN3O75636 299 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 ARG1P05089 322 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 PRPS2P11908 318 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 ATF6P18850 670 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 RAB3BP20337 219 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 F2RP25116 425 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 CEACAM6P40199 344 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 SLC1A2P43004 574 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 UBE2MP61081 183 aaKnown RBP3.73□□□□□ -1.81
VPS50-212ENST00000476413 PSMD5Q16401 504 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 PIP5KL1Q5T9C9 394 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 AGBL2Q5U5Z8 902 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 CEMP1Q6PRD7 247 aaPredicted RBP3.73□□□□□ -1.81
VPS50-212ENST00000476413 FAM92BQ6ZTR7 304 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 NPWQ8N729 165 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 OR10AD1Q8NGE0 317 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 ZNF681Q96N22 645 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 TMEM38AQ9H6F2 299 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 ISYNA1Q9NPH2 558 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 LHX9Q9NQ69 397 aa3.73□□□□□ -1.81
VPS50-212ENST00000476413 RCL1Q9Y2P8 373 aaKnown RBP3.73□□□□□ -1.81
VPS50-212ENST00000476413 RAD51CO43502 376 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 ANGPTL7O43827 346 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 CLTAP09496 248 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 ZNF823P16415 610 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 GGT1P19440 569 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 CEACAM3P40198 252 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 HERVK_113P61574 105 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 PRR3P79522 188 aaKnown RBP3.72□□□□□ -1.81
VPS50-212ENST00000476413 SEMG2Q02383 582 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 CAPRIN1Q14444 709 aaKnown RBP3.72□□□□□ -1.81
VPS50-212ENST00000476413 GPR107Q5VW38 600 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 STUMQ69YW2 141 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 PLET1Q6UQ28 207 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 NPSR1Q6W5P4 371 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 OTUD6AQ7L8S5 288 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 MICU2Q8IYU8 434 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 FAM86B1Q8N7N1 296 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 MRGPRFQ96AM1 343 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 ZNF707Q96C28 371 aaPredicted RBP3.72□□□□□ -1.81
VPS50-212ENST00000476413 GALNT14Q96FL9 552 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 BMFQ96LC9 184 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 OR2A5Q96R48 311 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 MICU1Q9BPX6 476 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 SLC25A2Q9BXI2 301 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 PLA2G2FQ9BZM2 168 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 RPP21Q9H633 154 aaKnown RBP3.72□□□□□ -1.81
VPS50-212ENST00000476413 UVRAGQ9P2Y5 699 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 TBX21Q9UL17 535 aa3.72□□□□□ -1.81
VPS50-212ENST00000476413 IGHV5-51A0A0C4DH38 117 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 M0R3G1 203 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 ZBTB5O15062 677 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 RP2O75695 350 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 HLA-HP01893 362 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 HOXC4P09017 264 aaPredicted RBP3.71□□□□□ -1.82
VPS50-212ENST00000476413 UBCP0CG48 685 aaKnown RBP3.71□□□□□ -1.82
VPS50-212ENST00000476413 RPS15AP62244 130 aaKnown RBP3.71□□□□□ -1.82
VPS50-212ENST00000476413 TCP10Q12799 353 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 RCAN2Q14206 197 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 ARL9Q6T311 187 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 ENTHD1Q8IYW4 607 aa3.71□□□□□ -1.82
VPS50-212ENST00000476413 JAGN1Q8N5M9 183 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms