RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 KIAA1671Q9BY89 1806 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 METTL21EPA6NDL7 271 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM200CA6NKL6 621 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 GPR31O00270 319 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF264O43296 627 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 LILRB5O75023 590 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ADAP1O75689 374 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 DIRAS3O95661 229 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 CSTBP04080 98 aaKnown RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 GLAP06280 429 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 PNMTP11086 282 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 EMP2P54851 167 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 UBE2IP63279 158 aaKnown RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 GK2Q14410 553 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 C2orf68Q2NKX9 166 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 TSPO2Q5TGU0 170 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 IRAK1BP1Q5VVH5 260 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 SIGIRRQ6IA17 410 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 PEG10Q86TG7 708 aaKnown RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 RTN4RL2Q86UN3 420 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 OR6V1Q8N148 313 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 C12orf45Q8N5I9 185 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 EID2Q8N6I1 236 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 NUBPLQ8TB37 319 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 OR51E1Q8TCB6 317 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ELP5Q8TE02 316 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 IL1F10Q8WWZ1 152 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 DYRK2Q92630 601 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ARL5BQ96KC2 179 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 LPAR4Q99677 370 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 KIR3DX1Q9H7L2 352 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 APMAPQ9HDC9 416 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 RPS10P5Q9NQ39 176 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ASH2LQ9UBL3 628 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 OR5V1Q9UGF6 321 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 MOKQ9UQ07 419 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 SLC5A6Q9Y289 635 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 THADAQ6YHU6 1953 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 RALGAPA1Q6GYQ0 2036 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 EFCAB7A8K855 629 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 H3BP45 60 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ACOT7O00154 380 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 SUSD5O60279 629 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 MPC2O95563 127 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 GUSBP08236 651 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 MSX1P28360 303 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 PRKAR1BP31321 381 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ID4P47928 161 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 MTNR1BP49286 362 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ZXDAP98168 799 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 AANATQ16613 207 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 Q499Y3 187 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ABCA11PQ4W5N1 156 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 METTL11BQ5VVY1 283 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 LRRC56Q8IYG6 542 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 C9orf62Q8N4C0 152 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ESX1Q8N693 406 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 OR51T1Q8NGJ9 327 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 MARCH1Q8TCQ1 289 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 STK35Q8TDR2 534 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 RAB7BQ96AH8 199 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 REEP6Q96HR9 211 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 PGAM5Q96HS1 289 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 CRB3Q9BUF7 120 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 PRRG4Q9BZD6 226 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 DLL4Q9NR61 685 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 WNT16Q9UBV4 365 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 SUSD2Q9UGT4 822 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 IGHV5-51A0A0C4DH38 117 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 A0A0J9YY10 115 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 A0A0U1RQK1 487 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 A0A1B0GW55 424 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 M0R296 226 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 PRAMEF2O60811 474 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 HEXBP07686 556 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 DUX4L2P0CJ85 424 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 DUX4L3P0CJ86 424 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 DUX4L4P0CJ87 422 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 DUX4L5P0CJ88 424 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 DUX4L6P0CJ89 424 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 DUX4L7P0CJ90 424 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 PNLIPP16233 465 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 CD1CP29017 333 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 HRH1P35367 487 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 HMGA2P52926 109 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 PSG6Q00889 435 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 FGL1Q08830 312 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 PMPCAQ10713 525 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 CAMK2BQ13554 666 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 ALKBH1Q13686 389 aaKnown RBP4.5□□□□□ -1.69
CCDC39-204ENST00000476379 EOGTQ5NDL2 527 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 ARHGAP21Q5T5U3 1957 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 BEND4Q6ZU67 534 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 TMUB2Q71RG4 321 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 ANGPTL5Q86XS5 388 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 SAMD14Q8IZD0 417 aaPredicted RBP4.5□□□□□ -1.69
CCDC39-204ENST00000476379 STPG2Q8N412 459 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 GALNT16Q8N428 558 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 ISOC2Q96AB3 205 aa4.5□□□□□ -1.69
CCDC39-204ENST00000476379 SMIM19Q96E16 107 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms