RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 IFI30P13284 250 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 HLA-DOBP13765 273 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 CD53P19397 219 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 CCNA2P20248 432 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 CBLP22681 906 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 TCEA1P23193 301 aaKnown RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 APOBEC1P41238 236 aaKnown RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 CASP3P42574 277 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 RBM34P42696 430 aaKnown RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 CYB561P49447 251 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 HLCSP50747 726 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 FUT6P51993 359 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 POLR2HP52434 150 aaKnown RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 MLLT10P55197 1068 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 CDC20Q12834 499 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 SRSF6Q13247 344 aaKnown RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 RAPSNQ13702 412 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 PDK3Q15120 406 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 QPRTQ15274 297 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 SLC36A3Q495N2 470 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 CMPK2Q5EBM0 449 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 NHSL2Q5HYW2 709 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 TTC23Q5W5X9 447 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 SLC22A10Q63ZE4 541 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 HIST2H2BCQ6DN03 193 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 HIST2H2BDQ6DRA6 164 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 ZNF770Q6IQ21 691 aaPredicted RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 H3F3CQ6NXT2 135 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 SLC30A6Q6NXT4 461 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 WDR88Q6ZMY6 472 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 LINC00696Q6ZRV3 163 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 MBOAT2Q6ZWT7 520 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 PXKQ7Z7A4 578 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 NFE4Q86UQ8 179 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 MEX3DQ86XN8 651 aaKnown RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 NRMQ8IXM6 262 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 ODF3L1Q8IXM7 274 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 GPALPP1Q8IXQ4 340 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 C8orf59Q8N0T1 100 aaPredicted RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 C10orf53Q8N6V4 93 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 ZNF248Q8NDW4 579 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 OR4K17Q8NGC6 315 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 PFN4Q8NHR9 129 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 TEX47Q8TBZ9 253 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 GNPDA2Q8TDQ7 276 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 DUSP19Q8WTR2 217 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 DNAJA4Q8WW22 397 aaPredicted RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 TMEM234Q8WY98 164 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 JSRP1Q96MG2 331 aaPredicted RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 SECISBP2Q96T21 854 aaKnown RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 APOL4Q9BPW4 351 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 UTP23Q9BRU9 249 aaKnown RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 DGCR6LQ9BY27 220 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 GABARAPL3Q9BY60 117 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 ANKRD60Q9BZ19 345 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 RTN4RQ9BZR6 473 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 ZFHX2Q9C0A1 2572 aaPredicted RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 ING2Q9H160 280 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 PTGES2Q9H7Z7 377 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 SEBOXQ9HB31 216 aaPredicted RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 FAM118AQ9NWS6 357 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 GPR83Q9NYM4 423 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 STMN3Q9NZ72 180 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 CNIH4Q9P003 139 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 TMEM5Q9Y2B1 443 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 ADAM18Q9Y3Q7 739 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 DMXL1Q9Y485 3027 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 GMPPBQ9Y5P6 360 aa4.59□□□□□ -1.67
SSR3-206ENST00000476217 CHCHD2Q9Y6H1 151 aaPredicted RBP4.59□□□□□ -1.67
SSR3-206ENST00000476217 ZNF292O60281 2723 aa4.59□□□□□ -1.68
SSR3-206ENST00000476217 EP300Q09472 2414 aaPredicted RBP4.58□□□□□ -1.68
SSR3-206ENST00000476217 LOC100130705A0A1B0GUX0 176 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 EIF4E1BA6NMX2 242 aaKnown RBP4.58□□□□□ -1.68
SSR3-206ENST00000476217 ENO4A6NNW6 628 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 EFCAB9A8MZ26 197 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 FAM90A26D6RGX4 464 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 DENRO43583 198 aaKnown RBP4.58□□□□□ -1.68
SSR3-206ENST00000476217 SNX4O95219 450 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 LYPD3O95274 346 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 CLIC3O95833 236 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 GNAO1P09471 354 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 MYOD1P15172 320 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 CXCR1P25024 350 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 POLR2IP36954 125 aaKnown RBP4.58□□□□□ -1.68
SSR3-206ENST00000476217 SLC1A3P43003 542 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 OMPP47874 163 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 NUP107P57740 925 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 ESRRGP62508 458 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 ADARB1P78563 741 aaKnown RBP4.58□□□□□ -1.68
SSR3-206ENST00000476217 IL5RAQ01344 420 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 ARL16Q0P5N6 197 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 COX10Q12887 443 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 NPRL3Q12980 569 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 TSPAN31Q12999 210 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 IL18R1Q13478 541 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 TOMM20Q15388 145 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 TOMM34Q15785 309 aaPredicted RBP4.58□□□□□ -1.68
SSR3-206ENST00000476217 DEFB109BQ30KR1 87 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 AGAP7PQ5VUJ5 663 aa4.58□□□□□ -1.68
SSR3-206ENST00000476217 C1orf94Q6P1W5 598 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms