RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TSPO2Q5TGU0 170 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 FAM122BQ7Z309 247 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 PDIK1LQ8N165 341 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 OR56A4Q8NGH8 313 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 SELENOIQ9C0D9 397 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 ACTR6Q9GZN1 396 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 LY9Q9HBG7 655 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 LGALS13Q9UHV8 139 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 C15orf41Q9Y2V0 281 aa3.8□□□□□ -1.8
SMC5-203ENST00000475540 IGLV4-69A0A075B6H9 119 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 FAM189A1O60320 539 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 ZNF324O75467 553 aaPredicted RBP3.79□□□□□ -1.8
SMC5-203ENST00000475540 SLC25A27O95847 323 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 KRT16P08779 473 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 RBMY1CP0DJD4 496 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 GABRR2P28476 465 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 CFHR2P36980 270 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 KCNJ3P48549 501 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 CRISP1P54107 249 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 UGT2B15P54855 530 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 TPM4P67936 248 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 TRAM2Q15035 370 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 KLF17Q5JT82 389 aaPredicted RBP3.79□□□□□ -1.8
SMC5-203ENST00000475540 CLEC6AQ6EIG7 209 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 ANKRD26P1Q6NSI1 321 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 ASCL4Q6XD76 172 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 COPS6Q7L5N1 327 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 PIANPQ8IYJ0 282 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 ANGPTL6Q8NI99 470 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 ZNF502Q8TBZ5 544 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 CCDC12Q8WUD4 166 aaPredicted RBP3.79□□□□□ -1.8
SMC5-203ENST00000475540 ISOC2Q96AB3 205 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 CCDC124Q96CT7 223 aaKnown RBP3.79□□□□□ -1.8
SMC5-203ENST00000475540 ECHDC3Q96DC8 303 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 PRRG3Q9BZD7 231 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 DEFB129Q9H1M3 183 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 CWH43Q9H720 699 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 PRSS16Q9NQE7 514 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 KCNIP1Q9NZI2 227 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 ADA2Q9NZK5 511 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 KIF25Q9UIL4 384 aa3.79□□□□□ -1.8
SMC5-203ENST00000475540 RBMX2Q9Y388 322 aaKnown RBP3.79□□□□□ -1.8
SMC5-203ENST00000475540 MTCL1Q9Y4B5 1905 aaKnown RBP3.79□□□□□ -1.8
SMC5-203ENST00000475540 AQRO60306 1485 aaKnown RBP eCLIP3.79□□□□□ -1.86e-6■■■■□ 25.1
SMC5-203ENST00000475540 UBN2Q6ZU65 1347 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 ADGRA3Q8IWK6 1321 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
SMC5-203ENST00000475540 IGHV1OR21-1A0A087WYE8 117 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 E7EWF7 191 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 XRCC2O43543 280 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 CLDN11O75508 207 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 SERPINA5P05154 406 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 TPM3P06753 285 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 PRPS2P11908 318 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 ADRB3P13945 408 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 CTRB1P17538 263 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 TCN1P20061 433 aaPredicted RBP3.78□□□□□ -1.8
SMC5-203ENST00000475540 SLC26A3P40879 764 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 CSKP41240 450 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 UBE2MP61081 183 aaKnown RBP3.78□□□□□ -1.8
SMC5-203ENST00000475540 ECH1Q13011 328 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 COTL1Q14019 142 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 C18orf21Q32NC0 220 aaPredicted RBP3.78□□□□□ -1.8
SMC5-203ENST00000475540 CTRB2Q6GPI1 263 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 C11orf71Q6IPW1 123 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 Q6ZN92 141 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 SLC35D2Q76EJ3 337 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 NDUFAF7Q7L592 441 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 PID1Q7Z2X4 250 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 TMEM135Q86UB9 458 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 LHFPL3Q86UP9 236 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 SLC26A11Q86WA9 606 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 CD302Q8IX05 232 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 FAM9CQ8IZT9 166 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 ZNF557Q8N988 423 aaPredicted RBP3.78□□□□□ -1.8
SMC5-203ENST00000475540 OR51G1Q8NGK1 321 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 OR5K2Q8NHB8 316 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 TCP10LQ8TDR4 215 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 SMARCD2Q92925 531 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 APH1AQ96BI3 265 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 RNF185Q96GF1 192 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 OR2M2Q96R28 347 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 HIST1H4GQ99525 98 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 ACBD6Q9BR61 282 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 HINT2Q9BX68 163 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 PARVGQ9HBI0 331 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 RETNQ9HD89 108 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 EXD2Q9NVH0 621 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 STX18Q9P2W9 335 aaKnown RBP3.78□□□□□ -1.8
SMC5-203ENST00000475540 ZNF282Q9UDV7 671 aaPredicted RBP3.78□□□□□ -1.8
SMC5-203ENST00000475540 MMP17Q9ULZ9 603 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 TP53TG5Q9Y2B4 290 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 GOLT1BQ9Y3E0 138 aa3.78□□□□□ -1.8
SMC5-203ENST00000475540 CNTNAP1P78357 1384 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 IGKV1D-8A0A087WSZ0 117 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 GOLGA8QA0A0J9YX86 632 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 A0A1W2PRF3 423 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 A0A1W2PRM7 423 aa3.77□□□□□ -1.81
SMC5-203ENST00000475540 PRSS37A4D1T9 235 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms