RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 UPRTQ96BW1 309 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 NMD3Q96D46 503 aaKnown RBP17.16■□□□□ 0.34
VPS36-203ENST00000475375 CMBLQ96DG6 245 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 RBP7Q96R05 134 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 SIGLEC11Q96RL6 698 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 PCDHAC1Q9H158 963 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 POFUT1Q9H488 388 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 IL19Q9UHD0 177 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 WNK1Q9H4A3 2382 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 TMEM178BH3BS89 294 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 M0QZ24 198 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 WNT2P09544 360 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 IDH3AP50213 366 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 TAS2R41P59536 307 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 DEFB112Q30KQ8 113 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 ZNF362Q5T0B9 420 aaPredicted RBP17.15■□□□□ 0.34
VPS36-203ENST00000475375 DLEU7Q6UYE1 221 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 BRD3OSQ6XYD6 125 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 DHDDSQ86SQ9 333 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 NKAIN4Q8IVV8 208 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 SLC30A8Q8IWU4 369 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 CLDN22Q8N7P3 220 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 TAMM41Q96BW9 452 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 OR2V2Q96R30 315 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 PKP2Q99959 881 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 ALG12Q9BV10 488 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 PARD6BQ9BYG5 372 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 TXNIPQ9H3M7 391 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 C20orf141Q9NUB4 165 aa17.15■□□□□ 0.34
VPS36-203ENST00000475375 NDRG4Q9ULP0 352 aaKnown RBP17.15■□□□□ 0.34
VPS36-203ENST00000475375 IGHV2-70DA0A0C4DH43 119 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 ZNF205O95201 554 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 RBM34P42696 430 aaKnown RBP17.14■□□□□ 0.33
VPS36-203ENST00000475375 FIP1L1Q6UN15 594 aaKnown RBP17.14■□□□□ 0.33
VPS36-203ENST00000475375 ATG16L2Q8NAA4 619 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 OR10S1Q8NGN2 331 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 TMEM239Q8WW34 195 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 RAB40AQ8WXH6 277 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 UBE2FQ969M7 185 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 PLEKHA8Q96JA3 519 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 EBF4Q9BQW3 602 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 MARCH7Q9H992 704 aa17.14■□□□□ 0.33
VPS36-203ENST00000475375 C12orf71A8MTZ7 269 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 KITLGP21583 273 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 MSR1P21757 451 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 HTR5AP47898 357 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 MMP16P51512 607 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
VPS36-203ENST00000475375 SELPLGQ14242 412 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 ALG10Q5BKT4 473 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 INTS11Q5TA45 600 aaKnown RBP17.13■□□□□ 0.33
VPS36-203ENST00000475375 OLFML2AQ68BL7 652 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 C1orf94Q6P1W5 598 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 KLBQ86Z14 1044 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 POU5F2Q8N7G0 328 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 MMP27Q9H306 513 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 GCM1Q9NP62 436 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 SH3GLB1Q9Y371 365 aa17.13■□□□□ 0.33
VPS36-203ENST00000475375 NPIPB13A6NJU9 1138 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 SRRM5B3KS81 715 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 NPIPB4C9JG80 1138 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 IFNL4K9M1U5 179 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 TIMM23O14925 209 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 ERLIN1O75477 346 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 TUBG1P23258 451 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 SLC18A1P54219 525 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 RPL27P61353 136 aaKnown RBP17.12■□□□□ 0.33
VPS36-203ENST00000475375 PAX2Q02962 417 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 ENDOGQ14249 297 aaKnown RBP17.12■□□□□ 0.33
VPS36-203ENST00000475375 SLC27A4Q6P1M0 643 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 OR5AS1Q8N127 324 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 ZNF420Q8TAQ5 688 aaPredicted RBP17.12■□□□□ 0.33
VPS36-203ENST00000475375 FNDC8Q8TC99 324 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 RASSF5Q8WWW0 418 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 CGREF1Q99674 301 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 CCDC28BQ9BUN5 200 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 TUBG2Q9NRH3 451 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 TBCCD1Q9NVR7 557 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 MIOXQ9UGB7 285 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 MED31Q9Y3C7 131 aa17.12■□□□□ 0.33
VPS36-203ENST00000475375 DOK2O60496 412 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 SHOX2O60902 331 aaPredicted RBP17.11■□□□□ 0.33
VPS36-203ENST00000475375 CYB5R3P00387 301 aaPredicted RBP17.11■□□□□ 0.33
VPS36-203ENST00000475375 TNFRSF1BP20333 461 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 GUCY1A3Q02108 690 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 GPR157Q5UAW9 335 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 NLRC3Q7RTR2 1065 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 IGFN1Q86VF2 1251 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 OR8B3Q8NGG8 313 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 HAVCR1Q96D42 359 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 NEIL1Q96FI4 390 aaPredicted RBP17.11■□□□□ 0.33
VPS36-203ENST00000475375 MAGEB18Q96M61 343 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 OR8B2Q96RD0 313 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 CITED1Q99966 193 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 TMEM165Q9HC07 324 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 EMC7Q9NPA0 242 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 C1RLQ9NZP8 487 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 ARMCX1Q9P291 453 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 RIMS3Q9UJD0 308 aa17.11■□□□□ 0.33
VPS36-203ENST00000475375 STARD10Q9Y365 291 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms