RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 CCL21O00585 134 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ADAM10O14672 748 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 HCRTR2O43614 444 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 CHP2O43745 196 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 KALRNO60229 2985 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ZIC3O60481 467 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 FMO6PO60774 539 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 AGFG2O95081 481 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 CSTAP01040 98 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 EIF4EP06730 217 aaKnown RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 CELA3AP09093 270 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 CPN1P15169 458 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ARSBP15848 533 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 HIST1H1CP16403 213 aaKnown RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF3P17036 446 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 AGAP20933 346 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 PTBP1P26599 531 aaKnown RBP eCLIP3.73□□□□□ -1.816e-8■■■■■ 32.4
GAPVD1-216ENST00000474637 FKBP2P26885 142 aaKnown RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 CBX5P45973 191 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 SRP9P49458 86 aaKnown RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 AGFG1P52594 562 aaKnown RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 GFRA1P56159 465 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 HSF1Q00613 529 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF117Q03924 483 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 C3AR1Q16581 482 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 TP53I3Q53FA7 332 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ALG10BQ5I7T1 473 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 WIPI1Q5MNZ9 446 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 PDSS1Q5T2R2 415 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 C1orf185Q5T7R7 199 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 C1QL3Q5VWW1 255 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 HBMQ6B0K9 141 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 SFXN4Q6P4A7 337 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF613Q6PF04 617 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 APOOLQ6UXV4 268 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 CHMP1BQ7LBR1 199 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 KRT74Q7RTS7 529 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 FGD2Q7Z6J4 655 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 YRDCQ86U90 279 aaKnown RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 DOLPP1Q86YN1 238 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 GTPBP8Q8N3Z3 284 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 C9orf62Q8N4C0 152 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 RFLNBQ8N5W9 214 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 MEIOBQ8N635 442 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ZPLD1Q8TCW7 415 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 SSC4DQ8WTU2 575 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNRF4Q8WWF5 429 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ASB5Q8WWX0 329 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 TMEM234Q8WY98 164 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ACOT12Q8WYK0 555 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 WNT2BQ93097 391 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ZMYND19Q96E35 227 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 HYLS1Q96M11 299 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ABHD1Q96SE0 405 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ZNF559Q9BR84 538 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 MARVELD1Q9BSK0 173 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 NIPAL2Q9H841 368 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 CALHM2Q9HA72 323 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 SCPEP1Q9HB40 452 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 SPRR3Q9UBC9 169 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 ADAM30Q9UKF2 790 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 IER3IP1Q9Y5U9 82 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 CFAP46Q8IYW2 2715 aa3.73□□□□□ -1.81
GAPVD1-216ENST00000474637 A0A0B4J203 849 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 LINC00862A6NCI5 91 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 MCIDASD6RGH6 385 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 INMT-MINDY4F8WBC2 141 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 ETV2O00321 342 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 IMPA2O14732 288 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 BET1O15155 118 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 EEF1E1O43324 174 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 FZD7O75084 574 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TOXO94900 526 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 NUDT14O95848 222 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 POU3F2P20265 443 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SLC2A5P22732 501 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 AHCYP23526 432 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 THBS2P35442 1172 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PITPNBP48739 271 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 AKR1D1P51857 326 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 DLX5P56178 289 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 CLDN20P56880 219 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RRAS2P62070 204 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SIRPAP78324 504 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SKP2Q13309 424 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RIN1Q13671 783 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 EXOSC2Q13868 293 aaKnown RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 GPR176Q14439 515 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 CD226Q15762 336 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 GRK1Q15835 563 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 TUSC1Q2TAM9 212 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 PLPPR5Q32ZL2 321 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 NDUFAF6Q330K2 333 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 SLC25A53Q5H9E4 307 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RIPPLY2Q5TAB7 128 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 EEF1A1P5Q5VTE0 462 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RAET1LQ5VY80 246 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 DMKNQ6E0U4 476 aaPredicted RBP3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 OR5M10Q6IEU7 315 aa3.72□□□□□ -1.81
GAPVD1-216ENST00000474637 RPL13AP3Q6NVV1 102 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms