RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 OR6V1Q8N148 313 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 TEX47Q8TBZ9 253 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 NEU4Q8WWR8 484 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-203ENST00000474047 POM121L2Q96KW2 1035 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 FN3KQ9H479 309 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 ELOVL3Q9HB03 270 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 PLEK2Q9NYT0 353 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 ASH2LQ9UBL3 628 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 DNAJB9Q9UBS3 223 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 BAIAP2Q9UQB8 552 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 LOC100509620A0A075B734 347 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 TCRBV3S1A0A5B6 114 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 CIB2O75838 187 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 COX10Q12887 443 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 MOGQ16653 247 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 C1orf146Q5VVC0 180 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 Q71RC1 249 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-203ENST00000474047 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 ZCCHC24Q8N2G6 241 aaKnown RBP12.23□□□□□ -0.45
VAMP4-203ENST00000474047 MAPK1IP1LQ8NDC0 245 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 OR2T33Q8NG76 320 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 OR2AJ1Q8NGZ0 328 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 ABHD4Q8TB40 342 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 SNX33Q8WV41 574 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 PLA2G12AQ9BZM1 189 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 TPK1Q9H3S4 243 aa12.23□□□□□ -0.45
VAMP4-203ENST00000474047 OR6C68A6NDL8 312 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 DCTN6O00399 190 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 LY6G6DO95868 133 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 GPANK1O95872 356 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 IFNGP01579 166 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 MT-ND5P03915 603 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 COX5BP10606 129 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 POU1F1P28069 291 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 ALDH3B1P43353 468 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 ERVS71-1P61550 626 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 TEKQ02763 1124 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 KCNMB1Q16558 191 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 ALKBH6Q3KRA9 238 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 ZNF718Q3SXZ3 478 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 C1orf174Q8IYL3 243 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 CYB561A3Q8NBI2 242 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 GJC3Q8NFK1 279 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 OR2T4Q8NH00 348 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 C4orf45Q96LM5 186 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 NIPSNAP1Q9BPW8 284 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 RACGAP1Q9H0H5 632 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
VAMP4-203ENST00000474047 ARMC1Q9NVT9 282 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 SLCO1C1Q9NYB5 712 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 TAAR3PQ9P1P4 343 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 KLHL21Q9UJP4 597 aa12.22□□□□□ -0.45
VAMP4-203ENST00000474047 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 RTTNQ86VV8 2226 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 IGHV4-30-2A0A087WSY4 118 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 IGLV1-36A0A0B4J1U3 117 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 ARRDC5A6NEK1 342 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 RIIAD1A6NNX1 92 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 BHLHE40O14503 412 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 DEAF1O75398 565 aaPredicted RBP12.21□□□□□ -0.45
VAMP4-203ENST00000474047 ABHD16AO95870 558 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 TP53P04637 393 aaPredicted RBP12.21□□□□□ -0.45
VAMP4-203ENST00000474047 IGFBP1P08833 259 aaPredicted RBP12.21□□□□□ -0.45
VAMP4-203ENST00000474047 SLC25A16P16260 332 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 ZNF823P16415 610 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 MAD2L1BPQ15013 274 aaPredicted RBP12.21□□□□□ -0.45
VAMP4-203ENST00000474047 MEP1BQ16820 701 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 MSMPQ1L6U9 139 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 SPATA46Q5T0L3 261 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 TMEM154Q6P9G4 183 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 DNM1P46Q6ZS02 220 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 LNX2Q8N448 690 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 NPEPL1Q8NDH3 523 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 OR8D4Q8NGM9 314 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 PIMREGQ9BSJ6 248 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 GRIP1Q9Y3R0 1128 aa12.21□□□□□ -0.45
VAMP4-203ENST00000474047 RER1O15258 196 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 TIPRLO75663 272 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 CLPTM1O96005 669 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 DAOP14920 347 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 ZNF250P15622 560 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 WNT5AP41221 380 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 PPP1CBP62140 327 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 CD300LDQ6UXZ3 194 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 VASH1Q7L8A9 365 aaPredicted RBP12.2□□□□□ -0.46
VAMP4-203ENST00000474047 TMEM179BQ7Z7N9 219 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 ZBTB46Q86UZ6 589 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 ZNF101Q8IZC7 436 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 ATG16L2Q8NAA4 619 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 PAPD5Q8NDF8 572 aaKnown RBP12.2□□□□□ -0.46
VAMP4-203ENST00000474047 OR1F12Q8NHA8 337 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 OTULINQ96BN8 352 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 KIF17Q9P2E2 1029 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 MYEF2Q9P2K5 600 aaKnown RBP12.2□□□□□ -0.46
VAMP4-203ENST00000474047 LOC390937A0A1W2PQ73 354 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 NDUFS8O00217 210 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 HEXAP06865 529 aa12.2□□□□□ -0.46
VAMP4-203ENST00000474047 GAAP10253 952 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms